Detailed information NTG0666809

Bioinformatically predicted

Overview

• Name: comB6
• Type: Machinery gene
• Locus tag: MPG76_RS00695
• Genome accession: NZ_CP094098
• Coordinates: 147901..148956 (+)
• Length: 351 a.a.
• NCBI ID: WP_245039232.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe081
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 142901..153956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG76_RS00665 (MPG76_00665)	-	143326..143739 (+)	414	WP_120871873.1	universal stress protein	-
MPG76_RS00670 (MPG76_00670)	-	143759..144034 (+)	276	WP_245038523.1	ATP-dependent Clp protease adaptor ClpS	-
MPG76_RS00675 (MPG76_00675)	-	144034..146256 (+)	2223	WP_245038524.1	ATP-dependent Clp protease ATP-binding subunit	-
MPG76_RS00680 (MPG76_00680)	panD	146246..146596 (+)	351	WP_245038525.1	aspartate 1-decarboxylase	-
MPG76_RS00685 (MPG76_00685)	-	146607..146900 (+)	294	WP_000347923.1	YbaB/EbfC family nucleoid-associated protein	-
MPG76_RS00690 (MPG76_00690)	-	146900..147895 (+)	996	WP_245039231.1	PDZ domain-containing protein	-
MPG76_RS00695 (MPG76_00695)	comB6	147901..148956 (+)	1056	WP_245039232.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG76_RS00700 (MPG76_00700)	comB7	148972..149097 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG76_RS00705 (MPG76_00705)	comB8	149094..149837 (+)	744	WP_245038526.1	virB8 family protein	Machinery gene
MPG76_RS00710 (MPG76_00710)	comB9	149837..150799 (+)	963	WP_245038527.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG76_RS00715 (MPG76_00715)	comB10	150792..151928 (+)	1137	WP_245038528.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG76_RS00720 (MPG76_00720)	-	151998..153410 (+)	1413	WP_245038529.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 39891.88 Da
• Isoelectric Point: 8.8165

>NTDB_id=666809 MPG76_RS00695 WP_245039232.1 147901..148956(+) (comB6) [Helicobacter pylori strain Hpfe081]
MKNDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSVVALAFMLFAYRSLKEQNFFSASVLTEALLFVGFFALFNY
ALKNPMHFYEFFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHNEMSVWLFLSILQGLFLSVL
FAIIILVYLEVHVWCSLGVLFLAFGFFKTWRSVVVVCLKKCFALGFYKPFLLLVGFLNVSVTKALIDAHMQEKQDLSLLL
VVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATNLSANLSQNALNSLQYITTPPASSPISTSTRESASKEKETHSPT
FKVETTQLDVKIPNFKQKKVKKDTINTKNEI

Nucleotide

• Length: 1056 bp

>NTDB_id=666809 MPG76_RS00695 WP_245039232.1 147901..148956(+) (comB6) [Helicobacter pylori strain Hpfe081]
ATGAAAAATGACGCTTATGAGATTATCCTTTCTTGGTTTATCACGCCTCTCACGGCGATTTTAGGGCGTTTCGCTGAATT
TTTTCTCTACACTTTGCATGCGCAATTGGTGTTTAATAGCGTGGTCGCTTTGGCGTTCATGCTCTTTGCTTATAGGAGTT
TGAAAGAACAGAATTTCTTCAGCGCTAGCGTGCTAACAGAAGCGTTATTGTTTGTGGGGTTTTTTGCGCTTTTTAACTAC
GCTTTAAAAAATCCCATGCATTTTTATGAATTTTTCCAAAACGCTATTTTTATTGCGCCCAACATGATCACACAAAGCCT
CTCTCAAAGCTTGAGCAACTTTTCTAACCACGCGCTTTCTTTAGATTTTATCTTTAATCATGGTTTTTATGCCCTTAGTT
TTATCAGCGATTTGAGCCATAATGAAATGTCTGTGTGGCTTTTTTTAAGCATTTTGCAAGGGCTTTTTTTGAGCGTGCTG
TTTGCAATCATTATTTTAGTGTATTTAGAAGTGCATGTGTGGTGCTCTTTAGGGGTGCTGTTTTTAGCGTTTGGGTTTTT
TAAAACCTGGAGGAGCGTTGTGGTTGTGTGCCTAAAAAAATGCTTCGCTCTTGGGTTTTACAAGCCTTTTTTGTTGTTGG
TGGGGTTTTTGAATGTGTCGGTTACTAAGGCTTTAATAGACGCGCATATGCAAGAAAAACAAGACTTAAGCCTTTTATTG
GTGGTAGCGTTATTTTTGTGTTGCGTTTTTATCATAGGCGTGCCTTTTTTCATTAACGCTTTATTTAGGGTGCAAAACAG
CCTTAAAGAAACTTACAAACTCGCCACCAATTTGAGTGCTAACCTCAGCCAAAACGCCCTTAATTCCTTACAATATATCA
CGACCCCACCCGCTTCTTCTCCTATTTCTACTTCTACAAGAGAAAGCGCCTCCAAAGAAAAAGAAACGCATTCCCCCACA
TTCAAGGTAGAAACCACTCAATTAGATGTAAAAATCCCAAATTTCAAGCAAAAAAAGGTTAAAAAGGATACAATAAATAC
AAAAAATGAAATTTAA

Domains

Predicted by InterproScan.

• TrbL/VirB6 plasmid conjugal transfer protein (TrbL) (44-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB6	Helicobacter pylori 26695	96.866	100	0.969