Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG806_RS27500 Genome accession   NZ_CP108797
Coordinates   5992954..5994078 (-) Length   374 a.a.
NCBI ID   WP_328640138.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00882     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5987954..5999078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG806_RS27475 (OG806_27450) cseB 5988503..5989207 (-) 705 WP_059209193.1 two-component system response regulator CseB -
  OG806_RS27480 (OG806_27455) - 5989274..5989951 (-) 678 WP_406159417.1 hypothetical protein -
  OG806_RS27485 (OG806_27460) - 5989936..5990478 (-) 543 WP_020122536.1 SigE family RNA polymerase sigma factor -
  OG806_RS27490 (OG806_27465) - 5990715..5991662 (-) 948 WP_406159418.1 A/G-specific adenine glycosylase -
  OG806_RS27495 (OG806_27470) - 5992009..5992863 (+) 855 WP_328640137.1 hypothetical protein -
  OG806_RS27500 (OG806_27475) disA 5992954..5994078 (-) 1125 WP_328640138.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG806_RS27505 (OG806_27480) radA/sms 5994159..5995568 (-) 1410 WP_355940436.1 DNA repair protein RadA Machinery gene
  OG806_RS27510 (OG806_27485) - 5995845..5997521 (+) 1677 WP_406394067.1 BACON domain-containing protein -
  OG806_RS27515 (OG806_27490) - 5997613..5998470 (-) 858 WP_406159422.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40111.90 Da        Isoelectric Point: 4.9955

>NTDB_id=666736 OG806_RS27500 WP_328640138.1 5992954..5994078(-) (disA) [Streptomyces sp. NBC_00882]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTAMRDGLERVLRGNTGGLIILGFDKTVETMCTGGFVLDVEFAATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDQALYELDALTHAELLELPTVARALGYTGSPEAIDSGVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=666736 OG806_RS27500 WP_328640138.1 5992954..5994078(-) (disA) [Streptomyces sp. NBC_00882]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCGCCGGTGCCGATGGCCTGATGCGCGCCTCCCT
GAGCGCCGTGGCCCCCGGCACCGCCATGCGCGACGGCCTCGAGCGGGTGTTGCGCGGCAACACCGGCGGACTCATCATCC
TCGGCTTCGACAAGACGGTGGAGACGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCGCGGCCACGCGTCTGCGT
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCGTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCGTGCC
CGACGCGACGATCCCGACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGCGTGAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGTCTCATCGCCCTGTACGTCGACGGCCAGCGCCGTGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCAACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTCGTGACGGTCCGGGACGTCTCGGCCGTGGCCCAGCGCCTGGAGATGGTCCGCCGTATCG
CCACGGAGATCGCCGAGTACGTCGTCGAACTCGGCACGGACGGCCGCCTCCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAACGCGAACTGGTGGTCCGGGACTACGTCCCCGAACCCACCGCGAAGCGCTCCCGCACGGTCGACCA
GGCGCTGTACGAACTGGATGCCCTGACCCACGCGGAGCTCCTCGAACTCCCCACGGTCGCCCGCGCCCTGGGCTACACAG
GCTCCCCCGAGGCGATCGACTCGGGCGTCTCCCCCCGGGGCTTCCGCCTGCTGGCCAAGGTCCCCCGCCTGCCGGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGGGGCCTCCAGAAGCTCCTGGCGGCAAGCGTGGACGACCTGCAGACGGTGGA
CGGAGTGGGCGAGGCAAGGGCAAGGAGCGTCCGAGAGGGCCTGTCCCGCCTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433