Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG32_RS00260 | Genome accession | NZ_CP094073 |
| Coordinates | 60719..61294 (+) | Length | 191 a.a. |
| NCBI ID | WP_245036963.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe104 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55719..66294
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG32_RS00235 (MPG32_00235) | uvrD | 56410..58455 (+) | 2046 | WP_245036957.1 | DNA helicase UvrD | - |
| MPG32_RS00240 (MPG32_00240) | flgA | 58452..59108 (+) | 657 | WP_245036959.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG32_RS00245 (MPG32_00245) | - | 59118..59681 (+) | 564 | WP_245036961.1 | UbiX family flavin prenyltransferase | - |
| MPG32_RS00250 (MPG32_00250) | coaD | 59681..60154 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG32_RS00255 (MPG32_00255) | tmk | 60156..60731 (+) | 576 | WP_245019635.1 | dTMP kinase | - |
| MPG32_RS00260 (MPG32_00260) | comFC | 60719..61294 (+) | 576 | WP_245036963.1 | ComF family protein | Machinery gene |
| MPG32_RS00265 (MPG32_00265) | - | 61327..63366 (+) | 2040 | WP_245036965.1 | N-6 DNA methylase | - |
| MPG32_RS00270 (MPG32_00270) | - | 63363..64559 (+) | 1197 | WP_245036967.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21286.78 Da Isoelectric Point: 8.8864
>NTDB_id=666430 MPG32_RS00260 WP_245036963.1 60719..61294(+) (comFC) [Helicobacter pylori strain Hpfe104]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666430 MPG32_RS00260 WP_245036963.1 60719..61294(+) (comFC) [Helicobacter pylori strain Hpfe104]
ATGCGCTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG
AATTTCGCGCCAACAACCCACGGGATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGCTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG
AATTTCGCGCCAACAACCCACGGGATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |