Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG11_RS00290 | Genome accession | NZ_CP094067 |
| Coordinates | 61962..62537 (+) | Length | 191 a.a. |
| NCBI ID | WP_245052626.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe108 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 56962..67537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG11_RS00265 (MPG11_00265) | uvrD | 57653..59698 (+) | 2046 | WP_245052620.1 | DNA helicase UvrD | - |
| MPG11_RS00270 (MPG11_00270) | flgA | 59695..60351 (+) | 657 | WP_245052622.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG11_RS00275 (MPG11_00275) | - | 60361..60924 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG11_RS00280 (MPG11_00280) | coaD | 60924..61397 (+) | 474 | WP_220835218.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG11_RS00285 (MPG11_00285) | tmk | 61399..61974 (+) | 576 | WP_245052624.1 | dTMP kinase | - |
| MPG11_RS00290 (MPG11_00290) | comFC | 61962..62537 (+) | 576 | WP_245052626.1 | ComF family protein | Machinery gene |
| MPG11_RS00295 (MPG11_00295) | - | 62570..64690 (+) | 2121 | WP_245052628.1 | N-6 DNA methylase | - |
| MPG11_RS00300 (MPG11_00300) | - | 64687..65919 (+) | 1233 | WP_245052630.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21338.90 Da Isoelectric Point: 9.2848
>NTDB_id=666369 MPG11_RS00290 WP_245052626.1 61962..62537(+) (comFC) [Helicobacter pylori strain Hpfe108]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVSEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLKFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVSEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLKFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666369 MPG11_RS00290 WP_245052626.1 61962..62537(+) (comFC) [Helicobacter pylori strain Hpfe108]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTCAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTCTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAA
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTCAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTCTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAA
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.241 |
100 |
0.942 |