Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG46_RS00275 | Genome accession | NZ_CP094066 |
| Coordinates | 62680..63255 (+) | Length | 191 a.a. |
| NCBI ID | WP_245014410.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe110 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57680..68255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG46_RS00250 (MPG46_00250) | uvrD | 58371..60416 (+) | 2046 | WP_245014407.1 | DNA helicase UvrD | - |
| MPG46_RS00255 (MPG46_00255) | flgA | 60413..61069 (+) | 657 | WP_245014408.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG46_RS00260 (MPG46_00260) | - | 61079..61642 (+) | 564 | WP_000780122.1 | UbiX family flavin prenyltransferase | - |
| MPG46_RS00265 (MPG46_00265) | coaD | 61642..62115 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG46_RS00270 (MPG46_00270) | tmk | 62117..62692 (+) | 576 | WP_245014409.1 | dTMP kinase | - |
| MPG46_RS00275 (MPG46_00275) | comFC | 62680..63255 (+) | 576 | WP_245014410.1 | ComF family protein | Machinery gene |
| MPG46_RS00280 (MPG46_00280) | - | 63288..63633 (+) | 346 | Protein_54 | N-6 DNA methylase | - |
| MPG46_RS00285 (MPG46_00285) | - | 63657..64424 (-) | 768 | WP_001183570.1 | Eco47II family restriction endonuclease | - |
| MPG46_RS00290 (MPG46_00290) | dcm | 64393..65424 (-) | 1032 | WP_031249189.1 | DNA (cytosine-5-)-methyltransferase | - |
| MPG46_RS00295 (MPG46_00295) | - | 65474..66625 (+) | 1152 | WP_245014843.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21289.78 Da Isoelectric Point: 8.8864
>NTDB_id=666345 MPG46_RS00275 WP_245014410.1 62680..63255(+) (comFC) [Helicobacter pylori strain Hpfe110]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRASNTVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRASNTVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666345 MPG46_RS00275 WP_245014410.1 62680..63255(+) (comFC) [Helicobacter pylori strain Hpfe110]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTTCTAATACTGTTTCGTATGCCGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCATTTTGCGATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTTCTAATACTGTTTCGTATGCCGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCATTTTGCGATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |