Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG58_RS00270 | Genome accession | NZ_CP094061 |
| Coordinates | 62952..63527 (+) | Length | 191 a.a. |
| NCBI ID | WP_245011832.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe120 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57952..68527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG58_RS00245 (MPG58_00245) | uvrD | 58643..60688 (+) | 2046 | WP_245011827.1 | DNA helicase UvrD | - |
| MPG58_RS00250 (MPG58_00250) | flgA | 60685..61341 (+) | 657 | WP_245011828.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG58_RS00255 (MPG58_00255) | - | 61351..61914 (+) | 564 | WP_245011829.1 | UbiX family flavin prenyltransferase | - |
| MPG58_RS00260 (MPG58_00260) | coaD | 61914..62387 (+) | 474 | WP_245011830.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG58_RS00265 (MPG58_00265) | tmk | 62389..62964 (+) | 576 | WP_245011831.1 | dTMP kinase | - |
| MPG58_RS00270 (MPG58_00270) | comFC | 62952..63527 (+) | 576 | WP_245011832.1 | ComF family protein | Machinery gene |
| MPG58_RS00275 (MPG58_00275) | - | 63559..65598 (+) | 2040 | WP_245011833.1 | N-6 DNA methylase | - |
| MPG58_RS00280 (MPG58_00280) | - | 65595..66281 (+) | 687 | WP_245011834.1 | restriction endonuclease subunit S | - |
| MPG58_RS00285 (MPG58_00285) | - | 66308..66865 (+) | 558 | WP_245011835.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21348.94 Da Isoelectric Point: 8.8864
>NTDB_id=666237 MPG58_RS00270 WP_245011832.1 62952..63527(+) (comFC) [Helicobacter pylori strain Hpfe120]
MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLEGVSVYSFYAYSEVEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAINAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLEGVSVYSFYAYSEVEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRAINAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666237 MPG58_RS00270 WP_245011832.1 62952..63527(+) (comFC) [Helicobacter pylori strain Hpfe120]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAGTAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTATTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGTGATGAGAATTTAGATTATTTTTTACTAGATGATATTATC
ACTACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCATTTTGCGATCGCGCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAATTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAGTAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTATTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGTGATGAGAATTTAGATTATTTTTTACTAGATGATATTATC
ACTACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCATTTTGCGATCGCGCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |