Detailed information NTG0666124

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OG504_RS44215
• Genome accession: NZ_CP108733
• Coordinates: 9861126..9861761 (-)
• Length: 211 a.a.
• NCBI ID: WP_405994809.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00986
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 9856126..9866761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG504_RS44185 (OG504_44160)	-	9856783..9857910 (+)	1128	WP_405994805.1	8-amino-7-oxononanoate synthase	-
OG504_RS44190 (OG504_44165)	-	9857955..9858179 (-)	225	WP_405994806.1	DUF397 domain-containing protein	-
OG504_RS44195 (OG504_44170)	-	9858189..9859058 (-)	870	WP_405994807.1	helix-turn-helix domain-containing protein	-
OG504_RS44200 (OG504_44175)	-	9859271..9859729 (+)	459	WP_405994808.1	ATP-binding protein	-
OG504_RS44205 (OG504_44180)	-	9859814..9860287 (-)	474	WP_033278230.1	C40 family peptidase	-
OG504_RS44210 (OG504_44185)	-	9860810..9861118 (-)	309	WP_390168918.1	hypothetical protein	-
OG504_RS44215 (OG504_44190)	clpP	9861126..9861761 (-)	636	WP_405994809.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG504_RS44220 (OG504_44195)	-	9861825..9862121 (+)	297	WP_366437279.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
OG504_RS44225 (OG504_44200)	-	9862432..9862734 (+)	303	WP_019059531.1	urease subunit gamma	-
OG504_RS44230 (OG504_44205)	-	9862744..9863055 (+)	312	WP_328684781.1	urease subunit beta	-
OG504_RS44235 (OG504_44210)	-	9863048..9864769 (+)	1722	WP_405994810.1	urease subunit alpha	-
OG504_RS44240 (OG504_44215)	-	9864769..9865443 (+)	675	WP_405994811.1	urease accessory protein UreF	-
OG504_RS44245 (OG504_44220)	ureG	9865851..9866528 (+)	678	WP_405994812.1	urease accessory protein UreG	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 22921.94 Da
• Isoelectric Point: 4.7910

>NTDB_id=666124 OG504_RS44215 WP_405994809.1 9861126..9861761(-) (clpP) [Streptomyces sp. NBC_00986]
MTRPSARHVLPEFTERTSAGHRTLDPYSKLLEERIVFLGTPIDDISANDVMAQFMHLEYQAPDRDISLYINSPGGSFSAM
SAIYDTLRFVTCDVETTCLGQAGTSAAVLLAAGTPGKRSALPGARVVLRQPSLPEPIQGQASDLAIQAEELARTRVQLEE
LLALHTGRTVAQVSADIERDRIMDAQQALEYGLVDRIVATRKTSLTEPGGE

Nucleotide

• Length: 636 bp

>NTDB_id=666124 OG504_RS44215 WP_405994809.1 9861126..9861761(-) (clpP) [Streptomyces sp. NBC_00986]
ATGACCCGACCGTCCGCCCGTCACGTCCTGCCCGAGTTCACCGAGCGCACCAGCGCCGGCCACCGGACCCTCGACCCGTA
CTCGAAGCTGCTGGAGGAGCGGATCGTCTTCCTCGGGACGCCGATCGACGACATCTCGGCGAACGACGTGATGGCCCAGT
TCATGCACCTCGAGTACCAGGCACCGGACCGGGACATCTCGCTGTACATCAACTCGCCCGGCGGATCGTTCAGCGCGATG
TCGGCGATCTACGACACGTTGCGGTTCGTCACGTGTGACGTGGAGACGACCTGCCTCGGCCAGGCCGGCACCTCCGCGGC
GGTGCTGCTGGCGGCGGGCACCCCGGGCAAGCGGTCCGCGCTGCCGGGTGCGCGAGTGGTGCTCCGCCAGCCCTCGCTCC
CCGAGCCGATCCAGGGTCAGGCGAGTGATCTCGCCATCCAGGCCGAGGAGTTGGCGCGTACGCGGGTCCAACTGGAGGAA
CTGCTGGCCCTGCACACGGGCCGGACGGTGGCGCAGGTGAGCGCGGACATCGAGCGGGACCGGATCATGGATGCCCAACA
GGCCCTGGAATACGGGTTGGTGGACCGGATCGTGGCCACCCGCAAGACCTCGCTCACCGAGCCGGGCGGGGAGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	43.979	90.521	0.398
clpP	Streptococcus pneumoniae Rx1	43.523	91.469	0.398
clpP	Streptococcus pneumoniae D39	43.523	91.469	0.398
clpP	Streptococcus pneumoniae R6	43.523	91.469	0.398
clpP	Streptococcus pneumoniae TIGR4	43.523	91.469	0.398
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	43.915	89.573	0.393
clpP	Streptococcus mutans UA159	43.158	90.047	0.389
clpP	Streptococcus pyogenes JRS4	43.158	90.047	0.389
clpP	Streptococcus pyogenes MGAS315	43.158	90.047	0.389
clpP	Streptococcus thermophilus LMG 18311	42.268	91.943	0.389
clpP	Streptococcus thermophilus LMD-9	42.268	91.943	0.389
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	41.885	90.521	0.379
clpP	Lactococcus lactis subsp. cremoris KW2	41.885	90.521	0.379