Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG714_RS22995 Genome accession   NZ_CP108728
Coordinates   5268867..5269991 (+) Length   374 a.a.
NCBI ID   WP_406123643.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00989     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5263867..5274991
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG714_RS22980 (OG714_22945) - 5264608..5265465 (+) 858 WP_406123639.1 hypothetical protein -
  OG714_RS22985 (OG714_22950) - 5265470..5267176 (-) 1707 WP_406123640.1 BACON domain-containing protein -
  OG714_RS22990 (OG714_22955) radA/sms 5267375..5268784 (+) 1410 WP_406123642.1 DNA repair protein RadA Machinery gene
  OG714_RS22995 (OG714_22960) disA 5268867..5269991 (+) 1125 WP_406123643.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG714_RS23000 (OG714_22965) - 5270008..5270826 (-) 819 WP_406123645.1 hypothetical protein -
  OG714_RS23005 (OG714_22970) - 5271186..5272115 (+) 930 WP_406123647.1 A/G-specific adenine glycosylase -
  OG714_RS23010 (OG714_22975) - 5272457..5272996 (+) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG714_RS23015 (OG714_22980) - 5272984..5273673 (+) 690 WP_406123649.1 hypothetical protein -
  OG714_RS23020 (OG714_22985) cseB 5273879..5274586 (+) 708 WP_406123651.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40033.81 Da        Isoelectric Point: 4.9166

>NTDB_id=665771 OG714_RS22995 WP_406123643.1 5268867..5269991(+) (disA) [Streptomyces sp. NBC_00989]
MAANDRASAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDRTVEAMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPNIPTEETGTRHRTADRVSKQVAFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVLELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVNEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=665771 OG714_RS22995 WP_406123643.1 5268867..5269991(+) (disA) [Streptomyces sp. NBC_00989]
GTGGCAGCCAACGACCGGGCGTCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGCCTGGAGCGAATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAGGACCGTGGAAGCGATGTGCACAGGCGGTTTCATCCTGGACGTGGAGTTCACGGCCACCCGCCTGCGC
GAACTCTGCAAGCTGGACGGCGGCATCGTCGTCTCGTCCGACCTCTCCAAAATCCTCCGGGCGGGCGTCCAGCTGGTCCC
CGACCCGAACATCCCCACCGAAGAGACAGGCACCCGCCACCGCACGGCGGACCGCGTCAGCAAACAGGTCGCCTTCCCCG
TGGTCTCCGTCTCTCAGTCCATGCGCCTGATCGCCCTCTACGTAGACGGCCAACGCCGCGTACTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCAACGCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTGGCGGGCACGCTGTC
GGCCCTGGAGATCGAGGACTTGGTGACGGTCCGAGATGTCTCGGCAGTGGTCCAACGCCTGGAAATGGTCCGCCTGATCG
CCACCGAGATCGCCGAGTACGTACTGGAACTCGGCACGGACGGCCGCCTGCTCGCCCTCCAGCTGGAGGAGTTGATCGCG
GGCGTGGAACCGGAACGCGAACTGGTAGTACGCGACTACGTCCCCGAGCCCACGGCCAAACGCTCCCGCACGGTCAACGA
AGCCCTGGCCGAGCTCGACGCCCTCTCCCACGCGGAACTCCTCGAACTCCCCACCGTGGCCCGCGCGTTGGGCTACACCG
GCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCGCGAGGCTTCCGCCTCCTGGCCAAGGTCCCGCGCCTCCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGAGGCCTCCAGAAACTCCTGGCGGCAAGCGTCGACGACCTACAGACGGTCGA
CGGCGTGGGCGAGGCAAGGGCGAGAAGCGTACGAGAAGGCCTCTCCCGCCTCGCGGAATCGTCAATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43