Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MQP45_RS10680 Genome accession   NZ_CP093933
Coordinates   2120726..2121163 (+) Length   145 a.a.
NCBI ID   WP_242784134.1    Uniprot ID   -
Organism   Staphylococcus aureus strain WA121-2021_15363     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2115726..2126163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQP45_RS10650 (MQP45_10650) - 2115943..2116569 (+) 627 WP_000522384.1 nitroreductase family protein -
  MQP45_RS10655 (MQP45_10655) - 2116930..2117715 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  MQP45_RS14505 - 2118315..2118449 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  MQP45_RS10665 (MQP45_10665) - 2118685..2119248 (+) 564 WP_001105696.1 accessory gene regulator ArgB-like protein -
  MQP45_RS10670 (MQP45_10670) - 2119251..2119394 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide -
  MQP45_RS10675 (MQP45_10675) - 2119424..2120707 (+) 1284 WP_000447888.1 sensor histidine kinase -
  MQP45_RS10680 (MQP45_10680) agrA 2120726..2121163 (+) 438 WP_242784134.1 LytTR family DNA-binding domain-containing protein Regulator
  MQP45_RS10685 (MQP45_10685) - 2121235..2121344 (+) 110 Protein_2073 hypothetical protein -
  MQP45_RS10690 (MQP45_10690) - 2121532..2122491 (-) 960 WP_001253312.1 carbohydrate kinase -
  MQP45_RS10695 (MQP45_10695) - 2122488..2123972 (-) 1485 WP_000141432.1 glycoside hydrolase family 32 protein -
  MQP45_RS10700 (MQP45_10700) - 2124121..2125071 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 17319.82 Da        Isoelectric Point: 6.0025

>NTDB_id=665692 MQP45_RS10680 WP_242784134.1 2120726..2121163(+) (agrA) [Staphylococcus aureus strain WA121-2021_15363]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSDDIMFFESSTKSHRLIA
HLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=665692 MQP45_RS10680 WP_242784134.1 2120726..2121163(+) (agrA) [Staphylococcus aureus strain WA121-2021_15363]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAGATGATATTATGTTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCC
CATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAAAGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCA
TAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAGATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAAC
ACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(64-144)

Response regulator receiver domain (Response_reg)

(3-64)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

66.901

97.931

0.655