Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG698_RS22205 Genome accession   NZ_CP108707
Coordinates   4858829..4859953 (+) Length   374 a.a.
NCBI ID   WP_356286736.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01003     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4853829..4864953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG698_RS22190 (OG698_22170) - 4854435..4855286 (+) 852 WP_406111213.1 hypothetical protein -
  OG698_RS22195 (OG698_22175) - 4855319..4857034 (-) 1716 WP_406104928.1 BACON domain-containing protein -
  OG698_RS22200 (OG698_22180) radA/sms 4857289..4858698 (+) 1410 WP_406104930.1 DNA repair protein RadA Machinery gene
  OG698_RS22205 (OG698_22185) disA 4858829..4859953 (+) 1125 WP_356286736.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG698_RS22210 (OG698_22190) - 4860389..4861189 (-) 801 WP_406104932.1 hypothetical protein -
  OG698_RS22215 (OG698_22195) - 4861375..4862016 (+) 642 WP_406104934.1 phosphatase PAP2 family protein -
  OG698_RS22220 (OG698_22200) - 4862017..4862664 (-) 648 WP_326774666.1 response regulator transcription factor -
  OG698_RS22225 (OG698_22205) - 4862661..4864259 (-) 1599 WP_406104936.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40331.17 Da        Isoelectric Point: 4.9269

>NTDB_id=665606 OG698_RS22205 WP_356286736.1 4858829..4859953(+) (disA) [Streptomyces sp. NBC_01003]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELSTVARALGYTGSPETLDSAISPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=665606 OG698_RS22205 WP_356286736.1 4858829..4859953(+) (disA) [Streptomyces sp. NBC_01003]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCCGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGCGTGAGCAAGCAGGTCAGCTTCCCTG
TGGTCTCCGTGTCGCAGTCGATGCGGCTCATCGCCCTTTACGTGGACGGGCAGCGGCGCGTTCTCGAGGACTCGGCCGCG
ATTCTCTCCCGGGCGAATCAGGCGCTGGCGACTCTCGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACGCTCTC
CGCGCTCGAGATCGAGGATCTCGTCACCGTGCGCGATGTGACCGCGGTTGCGCAGCGGCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGACGGGCGACTGCTCGCCCTTCAGCTCGACGAATTGATCGCC
GGCGTCGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTATGTGCCTGAGCCCACTGCCAAGCGGTCCCGGACCGTTGATGA
GGCACTGTTCGAGCTCGATGCGCTGACGCATGCCGAGCTTCTTGAACTGTCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAAACCCTCGACTCGGCCATTTCGCCTCGTGGGTTCCGGCTGCTGGCGAAGGTGCCCCGGCTGCCTGGGGCG
ATCATTGACCGGCTTGTCGAGCACTTTGGCGGGTTGCAGAAGCTGCTCGCCGCCAGCGTCGATGATCTGCAGACTGTGGA
CGGCGTCGGGGAGGCTCGCGCCCGGAGCGTGCGGGAAGGGCTCTCGCGGTTGGCCGAGTCTTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43