Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG698_RS15355 Genome accession   NZ_CP108707
Coordinates   3349795..3350580 (+) Length   261 a.a.
NCBI ID   WP_100591111.1    Uniprot ID   A0ABV4SX88
Organism   Streptomyces sp. NBC_01003     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3344795..3355580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG698_RS15340 (OG698_15305) - 3345084..3345611 (+) 528 WP_326773779.1 TerD family protein -
  OG698_RS15345 (OG698_15310) - 3345689..3348595 (-) 2907 WP_399981999.1 vitamin B12-dependent ribonucleotide reductase -
  OG698_RS15350 (OG698_15315) nrdR 3348733..3349278 (-) 546 WP_326773781.1 transcriptional regulator NrdR -
  OG698_RS15355 (OG698_15320) dinR/lexA 3349795..3350580 (+) 786 WP_100591111.1 transcriptional repressor LexA Regulator
  OG698_RS15360 (OG698_15325) - 3350764..3352746 (-) 1983 WP_399981994.1 ATP-dependent DNA helicase -
  OG698_RS15365 (OG698_15330) - 3352787..3354757 (-) 1971 WP_406103541.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28153.94 Da        Isoelectric Point: 7.4237

>NTDB_id=665583 OG698_RS15355 WP_100591111.1 3349795..3350580(+) (dinR/lexA) [Streptomyces sp. NBC_01003]
MTTTADSATITAQDRSQGRLEPVHAMNDASMSAEGPKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDGHVWLLPHNSAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=665583 OG698_RS15355 WP_100591111.1 3349795..3350580(+) (dinR/lexA) [Streptomyces sp. NBC_01003]
GTGACCACCACCGCAGACAGCGCCACCATCACTGCCCAGGACCGTTCCCAGGGCCGACTCGAGCCGGTGCATGCCATGAA
TGACGCATCCATGAGCGCGGAGGGGCCAAAGCCCGCGCGCTCCTTGCCGGGCCGACCTCCCGGAATCCGCGCGGACAGCT
CGGGGCTCACGGACAGGCAGCGCCGCGTCATCGAGGTGATCAGGGACTCCGTGCAGCGGCGTGGTTACCCGCCGTCGATG
CGGGAGATCGGCCAGGCGGTGGGCCTGTCGAGCACGTCGTCGGTCGCGCACCAGCTGATGGCCCTCGAGCGCAAGGGCTT
CCTGCGCCGGGACCCGCACCGCCCCCGTGCCTACGAGGTCCGCGGGTCCGACCAGCCGAGCGCGCAGCCCACGGACACCG
CGGGCAAGCCGGCCGCGTCGTACGTCCCGCTCGTCGGCCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAAGAGTCCGTC
GAGGACGTGTTCCCCCTCCCCCGGCAGCTGGTCGGAGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGGCGACTCGATGAT
CGAGGCCGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGTCAGCCGGTCGCGGAGAACGGCGACATCGTCGCCGCGA
TGCTCGAGGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTCCCGCACAACTCCGCGTAC
CAGCCGATCCCCGGTGACGAGGCGACCATCCTCGGCAAGGTGGTGGCCGTTCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(54-117)

Peptidase S24-like (Peptidase_S24)

(143-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

81.226

0.375