Detailed information NTG0066552

Bioinformatically predicted

Overview

• Name: treR
• Type: Regulator
• Locus tag: SCSC_RS02325
• Genome accession: NZ_AP014647
• Coordinates: 459594..460304 (-)
• Length: 236 a.a.
• NCBI ID: WP_115342909.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: regulate expression of competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	458894..459442	459594..460304	flank	152

Gene organization within MGE regions

Location: 458894..460304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS02325 (SCSC_0479)	treR	459594..460304 (-)	711	WP_115342909.1	trehalose operon repressor	Regulator

Sequence

Protein

• Length: 236 a.a.
• Molecular weight: 27597.67 Da
• Isoelectric Point: 9.2438

>NTDB_id=66552 SCSC_RS02325 WP_115342909.1 459594..460304(-) (treR) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MKKYEQIFKLIEQDILNEKYQVNDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKLKGQGSKVTKQEQIDFPVSNLT
SYQELVQQHGINSKTNVIQLEKITVDKKLSNLTGFPEYRLVWRIVRQRVVDDVVSVLDIDYLDKSLVPSMTREIAEQSIY
AYLEGKLGLHIAYAQKEITIDPATNRDKILMDIENDQHVVSVKSKVYLTDGQQFQFTDSRHKLEKFRFIDFAKRQK

Nucleotide

• Length: 711 bp

>NTDB_id=66552 SCSC_RS02325 WP_115342909.1 459594..460304(-) (treR) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGAAGAAATATGAACAAATTTTTAAACTCATAGAACAAGATATTCTAAATGAAAAATATCAAGTTAATGATTATCTCCC
TAGCGAGCATGAACTCGTCCAAACCTACAAAGTCAGCCGTGATACCATTCGCAAGTCACTTGATTTACTTCAAAAAGCTG
GTCTTATCCAAAAACTGAAAGGGCAGGGCTCTAAAGTTACTAAACAAGAACAGATTGACTTTCCTGTCTCCAATCTGACT
AGTTACCAAGAACTCGTGCAACAGCATGGGATAAATTCTAAAACAAATGTCATTCAGTTAGAAAAAATCACGGTTGATAA
AAAGTTATCCAATCTCACAGGCTTTCCTGAATATCGTCTGGTATGGCGAATTGTCCGCCAGAGAGTTGTAGATGACGTCG
TTTCCGTCTTAGATATTGATTACCTTGATAAGAGCCTTGTCCCTTCCATGACTCGAGAAATAGCAGAACAATCGATTTAT
GCTTATCTAGAAGGAAAACTAGGGCTGCACATTGCTTATGCCCAAAAAGAAATCACAATTGATCCAGCTACAAACCGCGA
TAAAATTTTGATGGACATTGAAAATGATCAACATGTCGTTTCTGTTAAGTCCAAAGTCTATCTTACAGATGGACAGCAAT
TTCAATTCACAGATAGTCGCCATAAACTGGAAAAATTCCGTTTTATTGACTTTGCTAAGCGACAAAAATGA

Domains

Predicted by InterproScan.

• UTRA domain (UTRA) (90-227)

• Bacterial regulatory proteins, gntR family (GntR) (3-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
treR	Streptococcus mutans UA159	64.831	100	0.648