Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MQH03_RS07565 Genome accession   NZ_CP093914
Coordinates   1619582..1620208 (+) Length   208 a.a.
NCBI ID   WP_013097255.1    Uniprot ID   A0A427KI93
Organism   Enterobacter cloacae strain SD21     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1614582..1625208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQH03_RS07545 (MQH03_07545) - 1614982..1616742 (-) 1761 WP_038985584.1 Lon protease family protein -
  MQH03_RS07550 (MQH03_07550) matP 1616929..1617381 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  MQH03_RS07555 (MQH03_07555) ompA 1617445..1618500 (-) 1056 WP_028027914.1 porin OmpA -
  MQH03_RS07560 (MQH03_07560) sulA 1618855..1619364 (-) 510 WP_061771556.1 SOS-induced cell division inhibitor SulA -
  MQH03_RS07565 (MQH03_07565) sxy/tfoX 1619582..1620208 (+) 627 WP_013097255.1 TfoX/Sxy family DNA transformation protein Regulator
  MQH03_RS07570 (MQH03_07570) yccS 1620165..1622327 (-) 2163 WP_061771555.1 YccS family putative transporter -
  MQH03_RS07575 (MQH03_07575) - 1622347..1622793 (-) 447 WP_013097253.1 YccF domain-containing protein -
  MQH03_RS07580 (MQH03_07580) helD 1622916..1624970 (+) 2055 WP_038985577.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24000.57 Da        Isoelectric Point: 9.2254

>NTDB_id=665480 MQH03_RS07565 WP_013097255.1 1619582..1620208(+) (sxy/tfoX) [Enterobacter cloacae strain SD21]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGRPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=665480 MQH03_RS07565 WP_013097255.1 1619582..1620208(+) (sxy/tfoX) [Enterobacter cloacae strain SD21]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTAGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTGTGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGCCGGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATACAACGCTACCAGCGAAACCGGCTTAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTCCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCGCTCAGTATCAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAGGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A427KI93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567