Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SCSC_RS01590 Genome accession   NZ_AP014647
Coordinates   305250..305981 (+) Length   243 a.a.
NCBI ID   WP_006269366.1    Uniprot ID   -
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 300250..310981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS01560 (SCSC_0322) - 300574..302013 (+) 1440 WP_003070376.1 NCS2 family permease -
  SCSC_RS01565 (SCSC_0323) tsaE 302350..302790 (+) 441 WP_006269361.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SCSC_RS01570 (SCSC_0324) - 302783..303304 (+) 522 WP_006269358.1 GNAT family N-acetyltransferase -
  SCSC_RS01575 (SCSC_0325) - 303312..304427 (+) 1116 WP_006269345.1 LCP family protein -
  SCSC_RS01580 (SCSC_0326) - 304474..304761 (-) 288 WP_006269352.1 hypothetical protein -
  SCSC_RS01585 (SCSC_0327) - 304771..305181 (-) 411 WP_006269359.1 HIT family protein -
  SCSC_RS01590 (SCSC_0328) pptA 305250..305981 (+) 732 WP_006269366.1 ABC transporter ATP-binding protein Regulator
  SCSC_RS01595 (SCSC_0329) - 305978..307024 (+) 1047 WP_006269357.1 ABC transporter permease -
  SCSC_RS01600 (SCSC_0330) - 307075..307872 (+) 798 WP_006269344.1 phosphotransferase family protein -
  SCSC_RS01605 (SCSC_0331) trmB 307869..308504 (+) 636 WP_003078354.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SCSC_RS01610 (SCSC_0332) - 308671..310197 (-) 1527 WP_115342906.1 IS1182 family transposase -
  SCSC_RS09455 (SCSC_0333) - 310158..310339 (+) 182 Protein_293 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26934.41 Da        Isoelectric Point: 4.6533

>NTDB_id=66543 SCSC_RS01590 WP_006269366.1 305250..305981(+) (pptA) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDNPMAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVDQEVAFARVEQLLTKFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLKDEKAKGKSILMSTHVLDSAERMCDSFVILHKGEIRAKGNLSELQSEFSMPEASLNEIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=66543 SCSC_RS01590 WP_006269366.1 305250..305981(+) (pptA) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGGGAAATTTTAATTGACGGCGCTAAACTGCAAGACAATCCCATGGCTTATCGTAAGAAAATTGGATTTATTCCA
GAGACCCCTAGTTTATATGAGGAATTGACTTTAAGAGAGCACATTGAAACAGTTGCTATGGCTTATGATGTCGATCAAGA
GGTAGCTTTTGCGCGCGTGGAGCAATTATTGACCAAGTTTCGCTTAAAAGAAAAATTGGATTGGTTCCCCGTTCACTTTT
CAAAGGGAATGAAGCAAAAAGTCATGATTATTTGCGCCTTTGTAGTTGATCCGAGTCTCTTTATCGTGGATGAGCCATTT
TTGGGACTCGATCCAGTAGCGATTGCTGATTTGATAGAGCTTTTGAAAGATGAAAAGGCAAAAGGCAAGTCTATCCTGAT
GAGTACGCATGTGTTGGACTCAGCAGAAAGAATGTGTGATTCATTCGTGATTTTGCACAAGGGGGAAATCCGAGCGAAAG
GTAACTTATCAGAGTTGCAATCAGAATTTTCTATGCCAGAAGCTAGCCTGAATGAGATCTATCTGGCATTGACGGAAGAG
GCAAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.548

98.354

0.704
  pptA Streptococcus salivarius strain HSISS4

71.13

98.354

0.7

Multiple sequence alignment