Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   MQG37_RS06505 Genome accession   NZ_CP093911
Coordinates   1286306..1288735 (+) Length   809 a.a.
NCBI ID   WP_032999453.1    Uniprot ID   -
Organism   Aggregatibacter actinomycetemcomitans strain 16R     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1281306..1293735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQG37_RS06485 - 1283075..1283437 (+) 363 WP_005542369.1 hypothetical protein -
  MQG37_RS06490 folK 1283508..1284008 (-) 501 WP_005550118.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MQG37_RS06495 pcnB 1284018..1285454 (-) 1437 Protein_1253 polynucleotide adenylyltransferase PcnB -
  MQG37_RS06500 dksA 1285571..1286008 (-) 438 WP_005542366.1 RNA polymerase-binding protein DksA -
  MQG37_RS06505 rec2 1286306..1288735 (+) 2430 WP_032999453.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MQG37_RS06510 msbA 1288782..1290530 (+) 1749 WP_005546521.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  MQG37_RS06515 lpxK 1290549..1291523 (+) 975 WP_005546522.1 tetraacyldisaccharide 4'-kinase -
  MQG37_RS06520 - 1291545..1291724 (+) 180 WP_005546524.1 Trm112 family protein -
  MQG37_RS06525 kdsB 1291726..1292499 (+) 774 WP_005546526.1 3-deoxy-manno-octulosonate cytidylyltransferase -

Sequence

Protein


Download         Length: 809 a.a.        Molecular weight: 92219.98 Da        Isoelectric Point: 9.7458

>NTDB_id=665422 MQG37_RS06505 WP_032999453.1 1286306..1288735(+) (rec2) [Aggregatibacter actinomycetemcomitans strain 16R]
MSVSLDKLAIALIFSGLTLLFLPDRFLLSWQTACYLLLLLCPLMLLAYALRQDKIKQIVMWLLILMIQSAYVHQSAISIL
TQADNLANLPKTVHREFTVEEILHQQHYQTLVIRAKLAENLPEQRIYAQWKLKQPVNPGERYAGNLRLRPLSSRLNFDGF
DRQPWYFGKHITAWAEIKSAVKLENVFSLRQTALNQALQQTENLPRQGLLLALGFGERFRLDQKTWQIYQKTNTAHLIAI
SGLHIGLAMMLGFTLARLLQFALPTRYISPTFPILCGFIFALLYSQLAGLAIPTLRAMIALAMLYAIQYWRRYWTVWQFL
LRVIALLIFIDPLMLLSTSFWLSVGAVTCLIVWYQYFPLSLLQWRGHSLANSPWRKVRYVFGLFHLQFGLLWLFTPIQLL
FFNGISLNSFIANVIAVPLYSFVLVPLVLFAVVTQGAWHSWQLANDLAEKITALLTPWQDDWLAISIPHSLWITLCLTFL
FLVALYVIYKPTKPITSTLALSRQHRFKGFHFNPERALSLPLRKSAYCVGGGLIALCCLTLISQSISRPNWQLETLDVGQ
GLATLIVKDGKGVLYDTGPSWKGGSMAQLEILPYLQRQGIDLEWLILSHDDNDHAGGAKDILAMYPHIQLTTASQKRYGS
QNTEKNDRTFCQAGKQWHWQGLHFTVLSPENIVPRAENRDSCTLLLTDGTHHILLTGDADLSVEYKILPKLGKIHVLQVG
HHGSKTSTGQALVQHIQPDIALISSGRWNPWHFPHKDVVARLQQQGSQIYNTAYSGQISLLFYNEEIKIQTARAEFSPWY
RRLIGLSTK

Nucleotide


Download         Length: 2430 bp        

>NTDB_id=665422 MQG37_RS06505 WP_032999453.1 1286306..1288735(+) (rec2) [Aggregatibacter actinomycetemcomitans strain 16R]
GTGAGCGTTTCGTTGGATAAGTTGGCTATAGCCCTGATTTTTAGCGGTTTAACATTATTGTTTTTGCCCGATCGCTTTTT
ATTATCGTGGCAAACGGCGTGCTATTTACTCCTCTTATTATGTCCACTCATGTTGCTTGCTTATGCCCTGCGACAGGACA
AAATCAAGCAAATAGTAATGTGGCTACTGATCTTGATGATTCAGTCCGCTTACGTCCACCAATCGGCAATTTCCATACTG
ACCCAGGCGGATAATCTTGCCAATCTGCCGAAAACCGTTCACCGCGAATTTACCGTCGAGGAAATTCTGCATCAGCAGCA
TTATCAAACCCTGGTTATTCGCGCCAAACTCGCCGAAAATCTTCCCGAACAACGTATTTACGCGCAATGGAAACTCAAGC
AACCAGTCAACCCCGGCGAACGTTACGCAGGCAATTTACGCTTGCGACCGCTTTCTTCCCGCCTGAATTTTGACGGTTTT
GACCGCCAGCCATGGTATTTCGGCAAGCACATCACCGCTTGGGCAGAGATTAAAAGTGCGGTCAAATTGGAAAACGTTTT
TTCGTTACGCCAAACCGCTCTCAATCAAGCCTTACAACAAACGGAGAATTTACCCCGACAAGGCTTGTTGCTGGCACTCG
GTTTTGGCGAACGTTTCCGCTTAGACCAAAAAACTTGGCAAATTTATCAAAAAACAAATACGGCGCATTTAATTGCCATT
TCAGGGCTGCATATCGGACTGGCGATGATGCTGGGTTTTACCTTGGCGCGTCTACTGCAATTTGCCTTGCCGACGCGTTA
CATCAGCCCGACATTTCCGATTCTGTGCGGATTCATTTTTGCGCTGTTATACAGCCAACTGGCAGGGCTTGCTATTCCGA
CTTTACGCGCCATGATTGCGTTAGCCATGCTCTACGCGATTCAGTATTGGCGACGATATTGGACGGTATGGCAATTCTTG
TTAAGAGTGATTGCCTTGCTGATTTTTATCGATCCGCTAATGTTGCTTTCCACCAGCTTTTGGTTGTCAGTGGGCGCAGT
GACCTGTCTGATTGTTTGGTATCAGTATTTTCCGTTGTCTCTATTGCAATGGCGCGGCCATTCCCTTGCCAATTCGCCGT
GGCGGAAAGTGCGGTATGTTTTCGGCTTGTTTCATTTGCAATTCGGTCTGCTCTGGCTGTTCACGCCCATTCAGCTGTTG
TTTTTTAACGGCATTTCGTTAAATAGTTTTATCGCCAATGTCATCGCCGTGCCGCTTTATAGCTTCGTTTTGGTCCCGTT
GGTGTTATTTGCCGTAGTCACCCAGGGTGCGTGGCATTCGTGGCAGCTCGCCAACGATTTGGCGGAAAAAATCACCGCAC
TTTTGACGCCTTGGCAGGATGACTGGTTGGCAATTTCCATTCCGCACAGTTTATGGATAACCCTATGTTTAACCTTTCTT
TTTTTAGTGGCGCTCTATGTTATTTATAAACCGACCAAACCGATAACATCCACTTTAGCCTTGTCAAGGCAGCACCGCTT
TAAAGGATTTCATTTTAATCCGGAACGCGCCTTAAGTTTACCGTTACGAAAAAGCGCTTATTGCGTGGGCGGCGGGCTGA
TTGCCCTGTGTTGCCTGACGTTAATTTCTCAGTCTATTTCACGCCCGAACTGGCAATTAGAAACCTTGGACGTGGGGCAA
GGGTTGGCAACTTTAATCGTGAAAGACGGCAAAGGCGTGCTTTACGATACCGGCCCGAGTTGGAAGGGCGGCAGTATGGC
ACAATTGGAAATTCTGCCTTATTTACAACGGCAAGGCATTGATTTGGAATGGCTGATATTAAGCCATGACGACAACGATC
ACGCAGGTGGTGCCAAAGATATTTTAGCAATGTATCCCCATATTCAACTGACCACCGCTTCACAAAAGCGATATGGTTCC
CAAAACACCGAAAAAAATGACCGCACTTTTTGTCAAGCCGGTAAACAATGGCATTGGCAGGGGTTGCATTTTACCGTGCT
ATCACCGGAGAATATCGTGCCCCGTGCGGAAAATCGGGATTCCTGTACGCTTTTATTAACCGATGGCACGCACCATATTT
TGCTGACGGGCGATGCGGATCTTAGCGTGGAATATAAGATCCTACCGAAACTTGGCAAAATCCATGTGTTACAAGTGGGG
CATCACGGTAGCAAAACCTCGACGGGGCAGGCATTAGTGCAACATATTCAACCGGACATTGCGCTGATTTCCAGCGGACG
CTGGAACCCATGGCATTTTCCCCATAAAGACGTGGTGGCGCGCCTGCAACAGCAAGGATCACAAATTTATAATACGGCAT
ATAGCGGGCAAATCAGTCTATTGTTCTACAATGAAGAGATCAAAATTCAGACCGCGCGCGCTGAATTTTCGCCTTGGTAT
CGCAGATTGATTGGCTTGAGCACGAAATAA

Domains

Predicted by InterproScan.

Domain of unknown function (DUF4131) (DUF4131)

(34-179)

Metallo-beta-lactamase superfamily (Lactamase_B)

(557-745)

Competence protein (Competence)

(213-486)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

52.469

100

0.525