Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MOQ79_RS22735 Genome accession   NZ_CP093856
Coordinates   4653321..4653917 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain Bio30     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4648321..4658917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOQ79_RS22715 (MOQ79_22715) - 4648513..4650270 (-) 1758 WP_004147851.1 Lon protease family protein -
  MOQ79_RS22720 (MOQ79_22720) matP 4650456..4650908 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  MOQ79_RS22725 (MOQ79_22725) ompA 4651040..4652110 (-) 1071 WP_002898408.1 porin OmpA -
  MOQ79_RS22730 (MOQ79_22730) sulA 4652463..4652972 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  MOQ79_RS22735 (MOQ79_22735) sxy/tfoX 4653321..4653917 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  MOQ79_RS22740 (MOQ79_22740) yccS 4653931..4656066 (-) 2136 WP_021465041.1 YccS family putative transporter -
  MOQ79_RS22745 (MOQ79_22745) - 4656084..4656530 (-) 447 WP_002898425.1 YccF domain-containing protein -
  MOQ79_RS22750 (MOQ79_22750) helD 4656655..4658709 (+) 2055 WP_040238369.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=665316 MOQ79_RS22735 WP_004150836.1 4653321..4653917(+) (sxy/tfoX) [Klebsiella pneumoniae strain Bio30]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=665316 MOQ79_RS22735 WP_004150836.1 4653321..4653917(+) (sxy/tfoX) [Klebsiella pneumoniae strain Bio30]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51