Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   MOW04_RS08075 Genome accession   NZ_CP093546
Coordinates   1525683..1525961 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus sp. K1     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1520683..1530961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS08055 - 1521871..1522782 (+) 912 WP_046380996.1 ketopantoate reductase family protein -
  MOW04_RS08060 - 1522816..1524048 (-) 1233 WP_024572116.1 aminopeptidase -
  MOW04_RS08065 - 1524157..1524291 (-) 135 WP_003238865.1 protein YkpC -
  MOW04_RS08070 mreBH 1524392..1525399 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  MOW04_RS08075 abrB 1525683..1525961 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  MOW04_RS08080 kinC 1526151..1527437 (+) 1287 WP_003232333.1 two-component sensor histidine kinase KinC -
  MOW04_RS08085 - 1527453..1528280 (+) 828 WP_003232330.1 gamma-glutamylcyclotransferase -
  MOW04_RS08090 ktrC 1528343..1529008 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  MOW04_RS08095 ade 1529163..1530896 (+) 1734 WP_163131344.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=665138 MOW04_RS08075 WP_003244728.1 1525683..1525961(+) (abrB) [Bacillus sp. K1]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=665138 MOW04_RS08075 WP_003244728.1 1525683..1525961(+) (abrB) [Bacillus sp. K1]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCTGAAAATAAAGAATACGGTAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTGGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576