Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MOW04_RS07955 Genome accession   NZ_CP093546
Coordinates   1501611..1502186 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. K1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1496611..1507186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS07925 dapD 1496799..1497509 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MOW04_RS07930 - 1497579..1498703 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  MOW04_RS07935 - 1498765..1499010 (+) 246 WP_003232382.1 YkuS family protein -
  MOW04_RS07940 mscT 1499047..1499850 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  MOW04_RS07945 ahpA 1500087..1500629 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  MOW04_RS07950 ykuV 1500699..1501145 (+) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  MOW04_RS07955 rok 1501611..1502186 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  MOW04_RS07960 cse15 1502227..1503192 (-) 966 WP_024571970.1 spore protein Cse15 -
  MOW04_RS07965 - 1503329..1503928 (+) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  MOW04_RS07970 - 1503979..1504998 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  MOW04_RS07975 glp 1505016..1506308 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  MOW04_RS07980 mobB 1506269..1506790 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=665137 MOW04_RS07955 WP_003232378.1 1501611..1502186(+) (rok) [Bacillus sp. K1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=665137 MOW04_RS07955 WP_003232378.1 1501611..1502186(+) (rok) [Bacillus sp. K1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1