Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   MOW04_RS06290 Genome accession   NZ_CP093546
Coordinates   1213636..1214787 (+) Length   383 a.a.
NCBI ID   WP_163131094.1    Uniprot ID   -
Organism   Bacillus sp. K1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1208636..1219787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS06255 - 1209308..1210525 (+) 1218 WP_163131153.1 MFS transporter -
  MOW04_RS06260 - 1210689..1211267 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  MOW04_RS06265 spx 1211448..1211843 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  MOW04_RS06270 - 1211886..1212542 (-) 657 WP_003232944.1 TerC family protein -
  MOW04_RS06275 - 1212712..1212852 (+) 141 WP_119122854.1 hypothetical protein -
  MOW04_RS06280 mecA 1212819..1213475 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  MOW04_RS06285 - 1213470..1213592 (-) 123 WP_128473814.1 hypothetical protein -
  MOW04_RS06290 coiA 1213636..1214787 (+) 1152 WP_163131094.1 competence protein CoiA Machinery gene
  MOW04_RS06295 pepF 1215017..1216846 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  MOW04_RS06300 - 1216884..1217051 (-) 168 WP_003244944.1 hypothetical protein -
  MOW04_RS06305 spxH 1217365..1218264 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  MOW04_RS06310 - 1218261..1218659 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  MOW04_RS06315 cwlQ 1218914..1219648 (-) 735 WP_041340378.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44817.88 Da        Isoelectric Point: 9.9417

>NTDB_id=665132 MOW04_RS06290 WP_163131094.1 1213636..1214787(+) (coiA) [Bacillus sp. K1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDDFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFIRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=665132 MOW04_RS06290 WP_163131094.1 1213636..1214787(+) (coiA) [Bacillus sp. K1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGACTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTATCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAATTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGTGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961