Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MOW04_RS04630 Genome accession   NZ_CP093546
Coordinates   907939..908733 (+) Length   264 a.a.
NCBI ID   WP_128992557.1    Uniprot ID   -
Organism   Bacillus sp. K1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 902939..913733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS04600 - 903778..904809 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  MOW04_RS04605 - 904924..905805 (+) 882 WP_163130993.1 PhzF family phenazine biosynthesis isomerase -
  MOW04_RS04610 - 905893..906477 (+) 585 WP_032723010.1 nitroreductase -
  MOW04_RS04615 - 906516..906707 (-) 192 WP_003233561.1 YfhD family protein -
  MOW04_RS04620 - 906774..906884 (-) 111 WP_003223230.1 YfhE family protein -
  MOW04_RS04625 - 906939..907850 (-) 912 WP_163130995.1 TIGR01777 family oxidoreductase -
  MOW04_RS04630 recX 907939..908733 (+) 795 WP_128992557.1 recombination regulator RecX Regulator
  MOW04_RS04635 - 908735..909049 (+) 315 WP_003244592.1 YfhH family protein -
  MOW04_RS04640 - 909192..910385 (+) 1194 WP_003243500.1 MFS transporter -
  MOW04_RS04645 - 910417..910569 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MOW04_RS04650 - 910694..910963 (+) 270 WP_015252516.1 YfhJ family protein -
  MOW04_RS04655 - 911108..911626 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  MOW04_RS04660 spdL 911711..912043 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  MOW04_RS04665 ephM 912030..912890 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31063.25 Da        Isoelectric Point: 6.6686

>NTDB_id=665119 MOW04_RS04630 WP_128992557.1 907939..908733(+) (recX) [Bacillus sp. K1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=665119 MOW04_RS04630 WP_128992557.1 907939..908733(+) (recX) [Bacillus sp. K1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992