Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGA   Type   Machinery gene
Locus tag   MOV58_RS06780 Genome accession   NZ_CP093539
Coordinates   1331084..1332058 (+) Length   324 a.a.
NCBI ID   WP_002449861.1    Uniprot ID   -
Organism   Staphylococcus hominis strain C5     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1326084..1337058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOV58_RS06745 (MOV58_06745) rpmG 1326546..1326695 (+) 150 WP_002449881.1 50S ribosomal protein L33 -
  MOV58_RS06750 (MOV58_06750) - 1326904..1327455 (+) 552 WP_002449726.1 5-formyltetrahydrofolate cyclo-ligase -
  MOV58_RS06755 (MOV58_06755) - 1327455..1328912 (+) 1458 WP_077700497.1 rhomboid family intramembrane serine protease -
  MOV58_RS06760 (MOV58_06760) - 1328896..1329099 (+) 204 WP_037555982.1 YqgQ family protein -
  MOV58_RS06765 (MOV58_06765) - 1329096..1330082 (+) 987 WP_002449785.1 ROK family glucokinase -
  MOV58_RS06770 (MOV58_06770) - 1330082..1330405 (+) 324 WP_077700496.1 MTH1187 family thiamine-binding protein -
  MOV58_RS06775 (MOV58_06775) - 1330407..1331033 (+) 627 WP_002449717.1 MBL fold metallo-hydrolase -
  MOV58_RS06780 (MOV58_06780) comGA 1331084..1332058 (+) 975 WP_002449861.1 competence type IV pilus ATPase ComGA Machinery gene
  MOV58_RS06785 (MOV58_06785) comGB 1332036..1333094 (+) 1059 WP_077700546.1 competence type IV pilus assembly protein ComGB -
  MOV58_RS06790 (MOV58_06790) comGC 1333113..1333424 (+) 312 WP_002449700.1 competence type IV pilus major pilin ComGC Machinery gene
  MOV58_RS06795 (MOV58_06795) comGD 1333414..1333848 (+) 435 WP_002449773.1 competence type IV pilus minor pilin ComGD -
  MOV58_RS06800 (MOV58_06800) - 1334040..1334537 (+) 498 WP_002449908.1 competence protein ComG -
  MOV58_RS06805 (MOV58_06805) - 1334702..1335211 (+) 510 WP_002449809.1 shikimate kinase -
  MOV58_RS06810 (MOV58_06810) gcvT 1335403..1336494 (+) 1092 WP_002488553.1 glycine cleavage system aminomethyltransferase GcvT -

Sequence


Protein


Download         Length: 324 a.a.        Molecular weight: 36955.92 Da        Isoelectric Point: 8.2269

>NTDB_id=665092 MOV58_RS06780 WP_002449861.1 1331084..1332058(+) (comGA) [Staphylococcus hominis strain C5]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI

Nucleotide


Download         Length: 975 bp        

>NTDB_id=665092 MOV58_RS06780 WP_002449861.1 1331084..1332058(+) (comGA) [Staphylococcus hominis strain C5]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Staphylococcus aureus MW2

69.753

100

0.698

  comGA Staphylococcus aureus N315

69.753

100

0.698