Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MOV58_RS04160 Genome accession   NZ_CP093539
Coordinates   852508..853224 (-) Length   238 a.a.
NCBI ID   WP_002455088.1    Uniprot ID   -
Organism   Staphylococcus hominis strain C5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 847508..858224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOV58_RS04140 (MOV58_04140) - 848176..848400 (+) 225 WP_002448268.1 sulfurtransferase TusA family protein -
  MOV58_RS04145 (MOV58_04145) - 848511..849755 (+) 1245 WP_002448259.1 ammonium transporter -
  MOV58_RS04150 (MOV58_04150) - 850010..851497 (+) 1488 WP_077700786.1 sucrose-6-phosphate hydrolase -
  MOV58_RS04155 (MOV58_04155) - 851498..852469 (+) 972 WP_077700785.1 carbohydrate kinase -
  MOV58_RS04160 (MOV58_04160) agrA 852508..853224 (-) 717 WP_002455088.1 LytTR family DNA-binding domain-containing protein Regulator
  MOV58_RS04165 (MOV58_04165) - 853237..854526 (-) 1290 WP_049382327.1 GHKL domain-containing protein -
  MOV58_RS04170 (MOV58_04170) - 854548..854688 (-) 141 WP_002488089.1 cyclic lactone autoinducer peptide -
  MOV58_RS04175 (MOV58_04175) - 854691..855257 (-) 567 WP_002455090.1 accessory gene regulator AgrB -
  MOV58_RS04180 (MOV58_04180) - 855959..856744 (-) 786 WP_002455091.1 carbon-nitrogen family hydrolase -
  MOV58_RS04185 (MOV58_04185) - 856875..857498 (-) 624 WP_002455092.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27858.75 Da        Isoelectric Point: 5.2104

>NTDB_id=665081 MOV58_RS04160 WP_002455088.1 852508..853224(-) (agrA) [Staphylococcus hominis strain C5]
MKIFICEDDVKQRENMVSIINNYIMIEEKPMEIALATDDPYEIIEQSKEMNDVGCYFLDIQLEADINGIKLGSEIRKYDP
IGNIIFVTSHSELTYLTFVYKVSAMDFIFKDDPNQLKTRIIDCIETAHTRLKLLSKESNVETIELKRGSNSIYVQYDDVM
FFESSTKSHRLIAHLDNRQIEFYGNLKELAQLDDRFFRCHNSFVVNRHNIDSVDSKERIVTFRNGEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=665081 MOV58_RS04160 WP_002455088.1 852508..853224(-) (agrA) [Staphylococcus hominis strain C5]
ATGAAAATATTCATTTGTGAAGACGATGTGAAACAACGTGAAAATATGGTTTCAATTATTAACAACTATATAATGATTGA
AGAAAAACCGATGGAAATAGCGTTAGCGACAGATGATCCTTATGAAATTATTGAACAGTCAAAAGAAATGAATGATGTTG
GATGTTATTTTTTAGATATACAATTGGAAGCTGATATTAACGGTATTAAACTTGGAAGTGAAATTCGAAAGTATGATCCT
ATTGGGAATATCATCTTTGTTACAAGTCATAGTGAACTCACTTACCTAACATTTGTCTATAAGGTATCTGCAATGGATTT
TATTTTTAAAGATGATCCTAATCAACTAAAAACGCGAATAATAGATTGCATTGAAACTGCTCATACACGTTTAAAATTAC
TTTCAAAAGAAAGCAATGTTGAAACAATTGAATTAAAGCGTGGTAGCAATTCAATATATGTACAATATGATGATGTCATG
TTCTTTGAATCGTCTACAAAATCCCATCGTTTAATTGCACATCTTGATAACCGTCAGATTGAATTCTACGGAAATCTTAA
AGAATTAGCACAACTCGATGATCGTTTTTTCAGATGTCACAATAGTTTTGTTGTAAATCGTCATAATATCGATTCAGTCG
ATTCTAAAGAACGAATTGTAACTTTCAGAAATGGTGAGCATTGCTATGCCTCTGTACGTAATGTTAAAAAGATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

87.395

100

0.874