Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG254_RS35580 Genome accession   NZ_CP108659
Coordinates   7824612..7825391 (-) Length   259 a.a.
NCBI ID   WP_093911680.1    Uniprot ID   A0A3Q9EWN2
Organism   Streptomyces sp. NBC_01092     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7819612..7830391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG254_RS35570 (OG254_35495) - 7821044..7821916 (+) 873 WP_405590080.1 GNAT family N-acetyltransferase -
  OG254_RS35575 (OG254_35500) - 7822429..7824411 (+) 1983 WP_405590083.1 ATP-dependent DNA helicase -
  OG254_RS35580 (OG254_35505) dinR/lexA 7824612..7825391 (-) 780 WP_093911680.1 transcriptional repressor LexA Regulator
  OG254_RS35585 (OG254_35510) nrdR 7825956..7826525 (+) 570 WP_147994168.1 transcriptional regulator NrdR -
  OG254_RS35590 (OG254_35515) - 7826692..7829586 (+) 2895 WP_405590087.1 vitamin B12-dependent ribonucleotide reductase -
  OG254_RS35595 (OG254_35520) - 7829751..7830284 (-) 534 WP_405590090.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28051.80 Da        Isoelectric Point: 7.0666

>NTDB_id=664628 OG254_RS35580 WP_093911680.1 7824612..7825391(-) (dinR/lexA) [Streptomyces sp. NBC_01092]
MTTTADSATITAQDRSQGRLEPVHAMNEAMNPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=664628 OG254_RS35580 WP_093911680.1 7824612..7825391(-) (dinR/lexA) [Streptomyces sp. NBC_01092]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCATGAATCCCGAGGGACACAAGCGCTCCCTGCCGGGTCGACCTCCCGGTATCCGGGCGGACAGCTCAGGGCTCA
CCGACAGGCAGCGCCGCGTGATCGAAGTCATCAGGGATTCCGTGCAGCGCCGTGGCTACCCGCCGTCGATGCGGGAGATC
GGCCAGGCGGTCGGCCTGTCCAGCACGTCCTCGGTCGCGCACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTGCGCGGCTCCGACCAGGCCGCCTCCGTGCAGCCCACCGACACCGCCGGCA
AGCCCGCCGCGTCGTACGTCCCGTTGGTCGGCCGCATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTCGAGGAC
GTCTTCCCTCTCCCCCGCCAGCTGGTGGGCGACGGCGAGCTGTTCGTGCTCAAGGTTGTCGGTGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACGGTCCGCCGTCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCGCGATGCTCG
ACGGTGAGGCCACCGTGAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACTCCGCGTACGAGCCG
ATCCCCGGCGACGACGCGACCATCCTGGGCAAGGTGGTGGCGGTGCTGCGGCGCGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(141-253)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9EWN2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375