Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MON12_RS10325 Genome accession   NZ_CP093424
Coordinates   1986744..1987538 (+) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus pacificus strain MP6     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1981744..1992538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON12_RS10310 (MON12_10310) argR 1982583..1983032 (+) 450 WP_001032581.1 arginine repressor ArgR -
  MON12_RS10315 (MON12_10315) recN 1983300..1985039 (+) 1740 WP_000947752.1 DNA repair protein RecN Machinery gene
  MON12_RS10320 (MON12_10320) spoIVB 1985158..1986456 (+) 1299 WP_002028467.1 SpoIVB peptidase -
  MON12_RS10325 (MON12_10325) spo0A 1986744..1987538 (+) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  MON12_RS10330 (MON12_10330) - 1987783..1987929 (-) 147 WP_001247671.1 YycC family protein -
  MON12_RS10335 (MON12_10335) - 1987980..1988708 (+) 729 WP_000172558.1 glycerophosphodiester phosphodiesterase -
  MON12_RS10340 (MON12_10340) - 1988758..1988991 (-) 234 WP_001190192.1 DUF2627 domain-containing protein -
  MON12_RS10345 (MON12_10345) - 1989128..1991200 (+) 2073 WP_000811006.1 sigma-54-dependent Fis family transcriptional regulator -
  MON12_RS10350 (MON12_10350) yqiS 1991396..1992295 (+) 900 WP_000763072.1 phosphate butyryltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=664622 MON12_RS10325 WP_014297988.1 1986744..1987538(+) (spo0A) [Bacillus pacificus strain MP6]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=664622 MON12_RS10325 WP_014297988.1 1986744..1987538(+) (spo0A) [Bacillus pacificus strain MP6]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCACATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGGGCAATCC
GTCACGCAATTGAGGTAGCATGGAGTCGCGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822