Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   MON10_RS09840 Genome accession   NZ_CP093423
Coordinates   1571103..1571897 (+) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus paranthracis strain SL1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 1566103..1576897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON10_RS09825 (MON10_09825) argR 1566943..1567392 (+) 450 WP_001032581.1 arginine repressor ArgR -
  MON10_RS09830 (MON10_09830) recN 1567659..1569398 (+) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  MON10_RS09835 (MON10_09835) spoIVB 1569517..1570815 (+) 1299 WP_002028467.1 SpoIVB peptidase -
  MON10_RS09840 (MON10_09840) spo0A 1571103..1571897 (+) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  MON10_RS09845 (MON10_09845) - 1572051..1573025 (+) 975 WP_080451236.1 tyrosine-type recombinase/integrase -
  MON10_RS09850 (MON10_09850) - 1573894..1574517 (+) 624 WP_254232591.1 hypothetical protein -
  MON10_RS09855 (MON10_09855) - 1575894..1576136 (+) 243 WP_254232592.1 hypothetical protein -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=664573 MON10_RS09840 WP_014297988.1 1571103..1571897(+) (spo0A) [Bacillus paranthracis strain SL1]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=664573 MON10_RS09840 WP_014297988.1 1571103..1571897(+) (spo0A) [Bacillus paranthracis strain SL1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822