Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | MOP59_RS08810 | Genome accession | NZ_CP093400 |
| Coordinates | 1836076..1836681 (+) | Length | 201 a.a. |
| NCBI ID | WP_001202375.1 | Uniprot ID | A0A5I0N148 |
| Organism | Salmonella enterica subsp. enterica serovar Infantis strain R21.1147 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1802475..1844941 | 1836076..1836681 | within | 0 |
Gene organization within MGE regions
Location: 1802475..1844941
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MOP59_RS08680 (MOP59_08680) | ldtD | 1802515..1804362 (+) | 1848 | WP_000925896.1 | L,D-transpeptidase | - |
| MOP59_RS08685 (MOP59_08685) | - | 1804622..1805170 (+) | 549 | WP_000357052.1 | YcbK family protein | - |
| MOP59_RS08690 (MOP59_08690) | - | 1805198..1805845 (+) | 648 | WP_001109471.1 | MBL fold metallo-hydrolase | - |
| MOP59_RS08695 (MOP59_08695) | - | 1805943..1807198 (+) | 1256 | WP_086016038.1 | IS3-like element ISSen1 family transposase | - |
| MOP59_RS08700 (MOP59_08700) | aspC | 1807222..1808412 (-) | 1191 | WP_000462653.1 | aspartate transaminase | - |
| MOP59_RS08705 (MOP59_08705) | ompF | 1808597..1809688 (-) | 1092 | WP_000977709.1 | porin OmpF | - |
| MOP59_RS08710 (MOP59_08710) | asnS | 1810295..1811695 (-) | 1401 | WP_023993514.1 | asparagine--tRNA ligase | - |
| MOP59_RS08715 (MOP59_08715) | - | 1811896..1812357 (-) | 462 | WP_000762342.1 | Lrp/AsnC family transcriptional regulator | - |
| MOP59_RS08720 (MOP59_08720) | dpaL | 1812674..1813888 (+) | 1215 | WP_020438006.1 | diaminopropionate ammonia-lyase | - |
| MOP59_RS08725 (MOP59_08725) | - | 1814134..1815567 (+) | 1434 | WP_000893191.1 | amino acid carrier protein | - |
| MOP59_RS08730 (MOP59_08730) | pncB | 1815648..1816850 (-) | 1203 | WP_023993513.1 | nicotinate phosphoribosyltransferase | - |
| MOP59_RS08735 (MOP59_08735) | pepN | 1817117..1819729 (+) | 2613 | WP_023993512.1 | aminopeptidase N | - |
| MOP59_RS08740 (MOP59_08740) | pyrD | 1819937..1820947 (+) | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| MOP59_RS08745 (MOP59_08745) | zapC | 1821113..1821655 (+) | 543 | WP_023993511.1 | cell division protein ZapC | - |
| MOP59_RS08750 (MOP59_08750) | - | 1821652..1822761 (-) | 1110 | WP_023993510.1 | YcbX family protein | - |
| MOP59_RS08755 (MOP59_08755) | rlmKL | 1822860..1824968 (+) | 2109 | WP_023993509.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| MOP59_RS08760 (MOP59_08760) | - | 1824981..1826888 (+) | 1908 | WP_023993508.1 | ABC transporter ATP-binding protein | - |
| MOP59_RS08765 (MOP59_08765) | pqiA | 1826903..1828156 (+) | 1254 | WP_000333152.1 | membrane integrity-associated transporter subunit PqiA | - |
| MOP59_RS08770 (MOP59_08770) | pqiB | 1828161..1829801 (+) | 1641 | WP_000433414.1 | intermembrane transport protein PqiB | - |
| MOP59_RS08775 (MOP59_08775) | pqiC | 1829798..1830361 (+) | 564 | WP_000759136.1 | membrane integrity-associated transporter subunit PqiC | - |
| MOP59_RS08780 (MOP59_08780) | rmf | 1830617..1830784 (+) | 168 | WP_001537784.1 | ribosome modulation factor | - |
| MOP59_RS08785 (MOP59_08785) | fabA | 1830884..1831402 (-) | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| MOP59_RS08790 (MOP59_08790) | - | 1831471..1833231 (-) | 1761 | WP_000156457.1 | Lon protease family protein | - |
| MOP59_RS08795 (MOP59_08795) | matP | 1833417..1833869 (+) | 453 | WP_000877172.1 | macrodomain Ter protein MatP | - |
| MOP59_RS08800 (MOP59_08800) | ompA | 1833941..1834993 (-) | 1053 | WP_001670727.1 | porin OmpA | - |
| MOP59_RS08805 (MOP59_08805) | sulA | 1835350..1835859 (-) | 510 | WP_000288732.1 | SOS-induced cell division inhibitor SulA | - |
| MOP59_RS08810 (MOP59_08810) | sxy/tfoX | 1836076..1836681 (+) | 606 | WP_001202375.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| MOP59_RS08815 (MOP59_08815) | yccS | 1836668..1838821 (-) | 2154 | WP_000950876.1 | YccS family putative transporter | - |
| MOP59_RS08820 (MOP59_08820) | - | 1838840..1839286 (-) | 447 | WP_023993507.1 | YccF domain-containing protein | - |
| MOP59_RS08825 (MOP59_08825) | helD | 1839410..1841464 (+) | 2055 | WP_023993506.1 | DNA helicase IV | - |
| MOP59_RS08830 (MOP59_08830) | mgsA | 1841500..1841958 (-) | 459 | WP_023993505.1 | methylglyoxal synthase | - |
| MOP59_RS08835 (MOP59_08835) | - | 1842053..1842715 (-) | 663 | WP_000847719.1 | DUF2057 family protein | - |
| MOP59_RS08840 (MOP59_08840) | - | 1842889..1843302 (+) | 414 | WP_001537782.1 | CoA-binding protein | - |
| MOP59_RS08845 (MOP59_08845) | hspQ | 1843347..1843664 (-) | 318 | WP_000561983.1 | heat shock protein HspQ | - |
| MOP59_RS08850 (MOP59_08850) | rlmI | 1843722..1844933 (-) | 1212 | WP_000140480.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23174.94 Da Isoelectric Point: 8.7403
>NTDB_id=664378 MOP59_RS08810 WP_001202375.1 1836076..1836681(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain R21.1147]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG
Nucleotide
Download Length: 606 bp
>NTDB_id=664378 MOP59_RS08810 WP_001202375.1 1836076..1836681(+) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Infantis strain R21.1147]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
75.879 |
99.005 |
0.751 |