Detailed information    

insolico Bioinformatically predicted

Overview


Name   tonB2   Type   Machinery gene
Locus tag   AS4_RS19085 Genome accession   NZ_AP014630
Coordinates   4103217..4104098 (-) Length   293 a.a.
NCBI ID   WP_004725801.1    Uniprot ID   N8YHY0
Organism   Acinetobacter guillouiae strain NBRC 110550     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 4098217..4109098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS4_RS19055 (AS4_38450) - 4098552..4098926 (-) 375 WP_004725812.1 cytochrome b562 -
  AS4_RS19060 (AS4_38460) coaBC 4099089..4100354 (-) 1266 WP_004816940.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC -
  AS4_RS19065 (AS4_38470) radC 4100469..4101191 (+) 723 WP_004725808.1 DNA repair protein RadC -
  AS4_RS19070 (AS4_38480) - 4101229..4102140 (+) 912 WP_004725806.1 bestrophin family protein -
  AS4_RS19075 (AS4_38490) - 4102206..4102490 (+) 285 WP_096735193.1 antibiotic biosynthesis monooxygenase -
  AS4_RS19080 (AS4_38500) - 4102804..4103202 (+) 399 WP_096735194.1 hypothetical protein -
  AS4_RS19085 (AS4_38510) tonB2 4103217..4104098 (-) 882 WP_004725801.1 energy transducer TonB Machinery gene
  AS4_RS19090 (AS4_38520) - 4104331..4105011 (+) 681 WP_096735195.1 hypothetical protein -
  AS4_RS19095 (AS4_38530) - 4105162..4105869 (+) 708 WP_004725798.1 DUF3108 domain-containing protein -
  AS4_RS19100 (AS4_38540) - 4105973..4106548 (+) 576 WP_004725796.1 xanthine phosphoribosyltransferase -
  AS4_RS19105 (AS4_38550) - 4106702..4107562 (+) 861 WP_096735196.1 acyl-CoA thioesterase II -
  AS4_RS19110 (AS4_38560) - 4107786..4108148 (+) 363 WP_004725792.1 hypothetical protein -
  AS4_RS19115 (AS4_38570) wrbA 4108258..4108851 (-) 594 WP_096735197.1 NAD(P)H:quinone oxidoreductase -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33485.92 Da        Isoelectric Point: 7.4004

>NTDB_id=66376 AS4_RS19085 WP_004725801.1 4103217..4104098(-) (tonB2) [Acinetobacter guillouiae strain NBRC 110550]
MIKKLFANTQHSEYWWQDALFVGAVSAAVIAHVLFLSVQFGMPQENNTSTKEIAISIRPSEDEIKDADFLAQANQQGSGT
FRKEHRISSDMPAQAEDKSAGDQQLEALEQIQQKRELKFEEKVLMTVLSWQKQAEQNDRKKAMEELQSQMQAKTAMVASL
EAQYLQKQQNFSKQQKIKTLDGIQAKQDASAGYLDKFREKVEMYGNRYYPDLAKQQRLSGEVRLMVILNNEGGIRAIRLI
ESSGHSILDEAAKNSVRKGAPFGRFDSKMKDISELRIVRTWRFDPAESEFEVR

Nucleotide


Download         Length: 882 bp        

>NTDB_id=66376 AS4_RS19085 WP_004725801.1 4103217..4104098(-) (tonB2) [Acinetobacter guillouiae strain NBRC 110550]
ATGATAAAAAAATTATTTGCCAATACACAGCATTCTGAGTACTGGTGGCAAGACGCATTATTTGTTGGAGCTGTTTCTGC
AGCTGTCATTGCACATGTACTTTTTTTATCTGTTCAATTTGGAATGCCACAAGAAAATAATACCAGCACAAAAGAAATCG
CAATCAGTATTCGCCCAAGTGAAGATGAAATTAAAGATGCAGACTTTTTAGCGCAAGCAAATCAGCAAGGTTCTGGAACA
TTCCGTAAAGAGCATCGTATTTCAAGTGATATGCCAGCGCAAGCAGAAGACAAGAGTGCGGGTGATCAGCAACTCGAAGC
TTTAGAGCAAATACAGCAAAAACGAGAATTGAAATTCGAAGAAAAAGTATTAATGACGGTTCTTAGCTGGCAAAAGCAGG
CGGAACAAAACGATCGTAAAAAGGCCATGGAAGAGTTGCAGAGCCAGATGCAGGCTAAAACGGCAATGGTGGCGAGTTTA
GAAGCTCAATATTTACAGAAACAACAAAATTTTAGTAAACAACAAAAAATTAAAACCTTAGATGGTATTCAAGCCAAACA
AGATGCATCTGCTGGATATTTAGATAAATTTCGCGAAAAAGTTGAGATGTATGGAAACCGATATTACCCAGATCTTGCCA
AACAGCAGCGTCTTTCGGGTGAGGTCCGTTTAATGGTCATTCTCAATAATGAGGGTGGGATTCGTGCTATACGATTGATT
GAAAGCTCAGGTCATTCAATCCTCGATGAAGCTGCCAAAAACTCAGTGCGTAAAGGTGCACCTTTTGGACGTTTTGATTC
AAAAATGAAAGATATTTCTGAACTGCGGATTGTGCGCACTTGGCGTTTTGACCCAGCTGAATCTGAATTTGAAGTGCGCT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N8YHY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

71.672

100

0.717


Multiple sequence alignment