Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   AS4_RS17860 Genome accession   NZ_AP014630
Coordinates   3848302..3852828 (-) Length   1508 a.a.
NCBI ID   WP_096735061.1    Uniprot ID   -
Organism   Acinetobacter guillouiae strain NBRC 110550     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3843302..3857828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS4_RS17835 (AS4_36110) - 3844736..3845134 (-) 399 WP_096735057.1 YbaN family protein -
  AS4_RS17840 (AS4_36130) - 3845361..3846206 (+) 846 WP_096735058.1 DUF1853 family protein -
  AS4_RS17845 (AS4_36140) - 3846322..3846462 (+) 141 WP_004723791.1 entericidin A/B family lipoprotein -
  AS4_RS17850 (AS4_36150) dapE 3846619..3847752 (+) 1134 WP_096735059.1 succinyl-diaminopimelate desuccinylase -
  AS4_RS17855 (AS4_36160) - 3847829..3848293 (-) 465 WP_096735060.1 hypothetical protein -
  AS4_RS17860 (AS4_36170) chpA 3848302..3852828 (-) 4527 WP_096735061.1 Hpt domain-containing protein Regulator
  AS4_RS17865 (AS4_36180) - 3852974..3855043 (-) 2070 WP_004817697.1 methyl-accepting chemotaxis protein -
  AS4_RS17870 (AS4_36190) - 3855086..3855622 (-) 537 WP_004723799.1 chemotaxis protein CheW -
  AS4_RS17875 (AS4_36200) - 3855626..3855994 (-) 369 WP_004723801.1 PleD family two-component system response regulator -
  AS4_RS17880 (AS4_36210) pilG 3856020..3856403 (-) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  AS4_RS17885 (AS4_36220) - 3856688..3857329 (+) 642 WP_096735062.1 hypothetical protein -

Sequence


Protein


Download         Length: 1508 a.a.        Molecular weight: 170367.58 Da        Isoelectric Point: 4.4509

>NTDB_id=66372 AS4_RS17860 WP_096735061.1 3848302..3852828(-) (chpA) [Acinetobacter guillouiae strain NBRC 110550]
MKEILKHLVEHVTLPEDAYLGQDEEILEIFVEELEEIFEQLQTSLDRWQLEEFKDTELVNIRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRIITKNLELTSEIQHYVSAVFNIYKFKLYSEFLNRKPHHLDLAPLVYLGQQLQQKQSLEPALDELLAL
SNTLDNENVITGLEIGEDTATVAVTSVTTPHVVDLVADSSTNTTEEEVAVESTVADDSLTSETLEIFVEESEEHLAAIKE
FLHLEEHTPDQYNRLIRALHTLRGSSSMAHVNEVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLYVLKLK
GNQAVELQTIYQKFNDAWERYDFQHQYQHSQTGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPAYFQQLAQQAQMLIDHTN
NRAAQGIHDFSLALKDGYEQVIRKPDLLNTDYAFEMFSKAHQEFIHLFDTLASGQRVSLNESTQAILAELHDYLHQEIDT
GVAGQIVETRTALDTEQQPDTVSMAANPVESVGNYVLTQINLDKQNIDSEHSQREFDADVLDIFIEEADELLVGMDHDLN
TWSSHPDDTTALNNLMRYLHTLKGGANMVQATHIGLIAHELETIYERVIKGQLKAEPHIIQAIRLIQDDVADRIQLIREK
SIDYPATHILSVLHNIDQQGPIEAVQASTAVEPQFSHDAVDLHELEYVADDIILAIDQTPELLETEPLDQDQQPAIDDAQ
LFIDANQDAGLDPVEVVARETFIEEARELIDDGLSILSQWFDQRSNRSFLLQLQRIAHSLKGGAKMVKLEEVADIAYELE
NAFEQFGLHNFNSNVYDGLLEKTFHWLDAAIFKHHYDNFEGLKSSLHSIEYVDVSAQLPEKLSRTNLIFEQSISEFVQGD
GTEPPSMLGEWDLSQKTESNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGEL
ESQIIAKHGDLSARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRL
VPFSRLLPRLQRLVRQTSSTVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDAEQRQKSGKALTGRIDLN
ISRQGTDVLVSFKDDGKGIDPKVIRDKAIEKGLIKTDQQLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSL
GGQVSVSSELGHGSTFTITVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDFQSYKLRYL
GEFTSNQVTPRLHGLAHSLPVLLIKGSLGQSIAILVDQLIGSRSQIVVKPIGKQFATINAIAGATILGDGQVCLILDGQN
IARQVQASTRGSAEHLQHDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIE
MPRMDGFEVTNLVRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLENIEALLTVK

Nucleotide


Download         Length: 4527 bp        

>NTDB_id=66372 AS4_RS17860 WP_096735061.1 3848302..3852828(-) (chpA) [Acinetobacter guillouiae strain NBRC 110550]
ATGAAAGAAATATTAAAACATTTAGTGGAACACGTTACTTTACCTGAAGATGCGTATCTTGGTCAGGATGAGGAAATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGCTACAAACCTCTCTTGATCGATGGCAACTCGAAGAGTTTA
AAGATACCGAATTGGTCAATATTCGCCGTTATTTTCATACGCTTAAGGGGTCTGGGCGTATGGTGGGGGCTAAACGTTCT
GGTGAACTTGCTTGGACTGTTGAAGATACATTAAATCGTATTATTACGAAAAATCTGGAACTTACTTCCGAGATTCAACA
CTATGTAAGTGCAGTATTTAATATTTATAAGTTCAAACTCTACTCAGAGTTTTTAAATCGAAAACCGCATCATTTAGATT
TAGCACCTTTGGTGTATTTGGGGCAACAGCTACAACAGAAACAAAGCTTAGAACCTGCTTTAGACGAGTTATTGGCATTA
TCAAATACACTGGATAATGAAAATGTCATTACTGGTTTGGAGATTGGTGAAGATACTGCAACAGTAGCAGTAACCTCAGT
GACCACTCCGCATGTGGTTGATCTCGTTGCAGATAGCTCTACAAATACGACTGAAGAAGAAGTGGCAGTTGAATCGACTG
TTGCAGATGATAGTTTAACCTCTGAAACCTTGGAAATCTTTGTTGAAGAGTCAGAGGAGCATCTGGCGGCAATTAAAGAA
TTTTTGCACTTAGAAGAACATACGCCTGATCAATATAATCGCTTGATTCGTGCCTTGCATACTTTGCGTGGCAGTTCTTC
AATGGCGCATGTCAATGAGGTCTTTGAAGCAAGTGGTAAGGTCGAGCATTTATTTAAAGTATTGGTTCAAGAAGATACCG
AGTCCTCAAAAAATGAAAATGCGCTACTGACTTACTATGCTGAATTTGTCAGTGATTATCTCTATGTTTTAAAGCTGAAA
GGTAATCAAGCTGTTGAGCTACAAACCATTTATCAAAAATTTAATGATGCTTGGGAACGCTACGATTTCCAACACCAATA
TCAACATTCACAAACGGGTTTAGTCACACAATTGGTTGATCTTGAGATCGATCTATTACTTGATGCCGAGTTTGAGTTTG
ATAAGCGCGCCCAAGTTGAATATCCAGCATATTTCCAACAACTGGCTCAACAAGCGCAGATGTTGATAGATCATACCAAT
AATCGTGCTGCACAAGGCATTCATGATTTTAGTCTTGCTTTAAAAGATGGTTATGAACAAGTTATTCGCAAGCCAGATTT
ATTAAATACTGATTATGCTTTTGAAATGTTTTCTAAGGCCCATCAGGAATTTATTCATTTATTCGATACTTTGGCCTCAG
GACAAAGAGTCAGCCTAAATGAATCAACACAAGCGATTTTGGCTGAGTTACATGACTATTTACATCAAGAAATAGACACT
GGTGTTGCTGGTCAAATTGTTGAAACAAGGACTGCGCTAGATACTGAACAGCAGCCAGATACAGTCTCAATGGCAGCGAA
CCCTGTTGAATCAGTAGGGAACTATGTACTGACGCAAATTAATCTGGATAAACAGAATATTGACTCAGAACATAGTCAAC
GTGAATTTGATGCTGATGTTCTCGATATTTTTATTGAAGAAGCCGACGAATTGTTGGTTGGAATGGACCATGACTTAAAT
ACTTGGTCAAGCCATCCTGATGACACAACCGCATTAAACAATTTGATGCGTTATTTGCATACCTTAAAAGGTGGTGCAAA
TATGGTGCAAGCCACCCATATTGGTTTGATTGCGCACGAGTTGGAAACCATTTATGAACGCGTGATTAAAGGTCAACTCA
AAGCAGAACCACACATTATTCAAGCGATTCGTTTAATTCAAGATGATGTGGCAGATCGTATTCAATTGATCCGTGAAAAA
TCAATTGATTATCCAGCTACTCATATTCTCAGTGTTTTACACAATATTGATCAGCAAGGTCCGATTGAAGCTGTTCAAGC
ATCAACTGCGGTTGAGCCACAATTTAGTCATGATGCAGTAGATTTGCATGAACTTGAATATGTTGCAGATGATATCATTT
TAGCGATTGATCAAACTCCAGAACTGCTTGAAACTGAACCGTTGGATCAAGATCAACAACCTGCAATTGATGATGCTCAA
TTGTTTATAGATGCAAATCAAGATGCAGGTTTAGATCCTGTTGAAGTTGTTGCTCGAGAAACCTTTATTGAAGAAGCACG
AGAGCTGATTGATGATGGTTTGAGCATTTTATCTCAATGGTTTGATCAGCGTAGCAACCGTAGTTTCCTACTCCAATTAC
AACGTATTGCACACAGCTTAAAAGGCGGTGCAAAAATGGTGAAATTGGAAGAAGTGGCTGATATTGCATATGAATTAGAA
AATGCATTTGAGCAATTTGGTTTACATAATTTTAACTCGAATGTTTATGATGGTTTATTGGAAAAAACCTTTCATTGGCT
AGATGCTGCAATCTTTAAACATCACTATGATAATTTTGAAGGCTTAAAATCGAGCCTACATAGTATTGAATATGTTGATG
TATCCGCACAGCTTCCAGAAAAACTATCTCGAACAAACTTAATCTTTGAGCAATCGATCAGTGAGTTTGTTCAGGGGGAT
GGTACAGAGCCACCGTCAATGTTGGGTGAATGGGATCTGTCACAAAAAACTGAATCCAATAATGAGATGATTCGTATCTC
TGCGGATTTGGTTGAAAAAATGATTGACCTTTCTGGTGAAAACGCGATCAACCGTTCACGTATTGAGATGGATTTGGGCC
AGTTAGGGAATACCCTGACTGATATGGAGTTGGCTATTCAACGTTTGGCAGATCAGCTACGCCGTATGGAAGGTGAGTTA
GAAAGCCAAATCATTGCAAAACATGGCGATTTAAGCGCTCGCTATGCTGATTTCGACCCTTTAGAAATGGACCAATATTC
ATCTCTAAACCAGTTATCAAAATCGTTGGCTGAATCGGCATCTGACTTGGTTGATTTTAAAACCACGTTGGCTGAAAAGA
TTCGTGATACTGAAGGTTTATTACTTCAGCAATCTCGTATTCAAGCTGAAATTCAGGAAAGCTTGATGCGTACTCGTCTA
GTACCATTCTCAAGACTGTTACCTCGATTACAGCGCTTGGTTCGCCAGACCTCTTCAACCGTGAATAAACCCACTGAACT
TTTAGTCAATAATACTGAAGGGGAGTTGGATCGTAATATTCTGGAAAAATTAGTTTCACCGTTAGAGCATATGTTGCGTA
ATGCGATTGACCACGGGATTGAAGATGCGGAACAGCGTCAGAAGTCGGGCAAAGCGTTGACTGGTCGAATTGATTTGAAT
ATTAGCCGTCAAGGTACAGATGTACTTGTATCGTTTAAAGATGATGGTAAAGGAATTGATCCAAAAGTTATTCGTGATAA
AGCAATCGAAAAAGGTTTAATCAAAACGGATCAACAGTTAGAGCCTGAGGAAATCCTACAGTTTATTTTCCATCCAGGTT
TTAGTACAGCGCAACAAGTGACACAAATCTCTGGTCGTGGTGTTGGCTTGGATGTTGTACAAAGTGAAATTAAATCACTT
GGTGGACAAGTGAGTGTCAGTTCTGAGTTGGGGCATGGTTCAACCTTTACGATTACTGTACCTACAACAGTTGCGGTCAG
CGATGCCTTGATGGTGAAAGTGGGTGATCAGCAATTTGCAGTTCCATTATCGCAAATTGATCGTATTGTTCGAATTTCCC
CAGCCGCTTTGGAAGAATATTTTGAAACTCAAAATGACTATTTTGATATCGATTTCCAAAGCTATAAGCTACGTTATTTG
GGGGAGTTTACCTCGAATCAAGTCACTCCACGGTTACATGGGCTTGCACATTCATTGCCAGTGTTGTTGATCAAGGGAAG
CTTGGGGCAATCGATTGCCATTCTGGTTGATCAGTTAATTGGTTCACGTTCACAAATTGTGGTTAAACCGATTGGTAAGC
AGTTTGCTACCATCAATGCAATTGCGGGTGCAACTATTCTGGGTGATGGTCAGGTGTGTTTGATTCTGGATGGGCAAAAT
ATTGCACGACAAGTTCAAGCATCTACTCGTGGTAGTGCTGAACATCTTCAACATGATAAACAACGTCATCGAGATCAACG
CCGTTTGATTATGATTGTGGATGACTCAGTTACCGTTCGTAAGGTCACTTCACGCTTGCTTGAACGCCAAGGTTTCGATG
TAATTACTGCGAAAGATGGTGTGGATGCGATTGAGCAACTTGAAAATGTCAAACCAGACTTGATGTTACTGGATATTGAA
ATGCCACGAATGGATGGTTTTGAAGTCACCAACTTGGTTCGCCATCACGAAATTCACCGCGATTTGCCAATCATCATGAT
TACGTCAAGAACAGGTGAAAAACATCGTGAACGGGCATTTAGCTTAGGTGTGACAAATTATATGGGTAAACCATTCCAAG
AAGCTGATTTATTGGAAAATATTGAAGCTTTGTTGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

59.082

100

0.597


Multiple sequence alignment