Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MNO13_RS16475 Genome accession   NZ_CP093332
Coordinates   3548732..3549346 (-) Length   204 a.a.
NCBI ID   WP_064548155.1    Uniprot ID   A0A3G2IBN4
Organism   Buttiauxella ferragutiae strain H4-C11     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3543732..3554346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNO13_RS16460 (MNO13_16460) helD 3543942..3545996 (-) 2055 WP_241939023.1 DNA helicase IV -
  MNO13_RS16465 (MNO13_16465) - 3546129..3546575 (+) 447 WP_064548151.1 YccF domain-containing protein -
  MNO13_RS16470 (MNO13_16470) yccS 3546600..3548735 (+) 2136 WP_133522512.1 YccS family putative transporter -
  MNO13_RS16475 (MNO13_16475) sxy/tfoX 3548732..3549346 (-) 615 WP_064548155.1 TfoX/Sxy family DNA transformation protein Regulator
  MNO13_RS16480 (MNO13_16480) sulA 3549657..3550076 (+) 420 Protein_3241 SOS-induced cell division inhibitor SulA -
  MNO13_RS16485 (MNO13_16485) ompA 3550437..3551507 (+) 1071 WP_121815658.1 porin OmpA -
  MNO13_RS16490 (MNO13_16490) matP 3551610..3552059 (-) 450 WP_064548160.1 macrodomain Ter protein MatP -
  MNO13_RS16495 (MNO13_16495) - 3552235..3553989 (+) 1755 WP_064548162.1 Lon protease family protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 23372.98 Da        Isoelectric Point: 10.1624

>NTDB_id=663700 MNO13_RS16475 WP_064548155.1 3548732..3549346(-) (sxy/tfoX) [Buttiauxella ferragutiae strain H4-C11]
MKSRSYARIHQSKEYLAPLGDINYRSLFGGYSLTVENVVFAMVSEGELYLRACEQSEVYFVARASESLVYNKRGRAIALN
YYHVDEGLWRDRQKLLQLSTDALFSARREKSRLKAQQRLKDLPNLTHSLEMMLWEVGIADVRTLHAYGAKRSWIKLRHLK
KGLGVQVLLALAGAICGVHEAALPAATRRELVEWGHLYAQRHTR

Nucleotide


Download         Length: 615 bp        

>NTDB_id=663700 MNO13_RS16475 WP_064548155.1 3548732..3549346(-) (sxy/tfoX) [Buttiauxella ferragutiae strain H4-C11]
ATGAAGAGCCGGTCTTATGCAAGGATTCATCAATCAAAAGAATATCTAGCGCCATTAGGTGATATAAATTATCGCTCGCT
ATTTGGTGGCTATAGTTTAACCGTCGAAAATGTGGTGTTTGCCATGGTTTCTGAGGGAGAATTGTATCTACGTGCCTGCG
AACAATCGGAAGTTTACTTTGTTGCAAGAGCGTCAGAGTCTCTGGTTTATAACAAACGTGGACGAGCCATTGCGCTCAAT
TATTATCATGTCGATGAAGGACTGTGGCGTGATCGGCAAAAGCTGTTGCAGCTTTCAACCGATGCATTGTTTAGCGCTCG
CCGTGAGAAATCTCGCCTGAAGGCGCAACAACGTCTCAAAGATTTACCTAATTTAACTCACAGCCTGGAAATGATGTTGT
GGGAAGTCGGGATTGCTGACGTGCGCACCCTTCATGCTTATGGTGCAAAACGGTCGTGGATAAAACTGAGACATTTGAAG
AAAGGGCTAGGGGTACAAGTCTTGTTGGCTTTAGCGGGGGCTATTTGTGGTGTTCATGAAGCCGCACTCCCGGCGGCAAC
GCGCCGGGAGTTGGTCGAGTGGGGGCATCTTTACGCGCAACGACACACCCGTTAA

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-103)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G2IBN4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

56.923

95.588

0.544