Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AS4_RS09740 | Genome accession | NZ_AP014630 |
| Coordinates | 2127244..2127627 (+) | Length | 127 a.a. |
| NCBI ID | WP_004821236.1 | Uniprot ID | A0AAX3PF86 |
| Organism | Acinetobacter guillouiae strain NBRC 110550 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2122244..2132627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS4_RS09710 (AS4_19600) | kdsB | 2123006..2123767 (+) | 762 | WP_096734010.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AS4_RS09715 (AS4_19610) | - | 2123834..2124814 (+) | 981 | WP_096734011.1 | DNA polymerase III subunit delta' | - |
| AS4_RS09720 (AS4_19620) | - | 2124841..2125182 (+) | 342 | WP_004821228.1 | PilZ domain-containing protein | - |
| AS4_RS09725 (AS4_19630) | - | 2125210..2125983 (+) | 774 | WP_004720827.1 | TatD family hydrolase | - |
| AS4_RS09730 (AS4_19640) | - | 2126071..2126685 (+) | 615 | WP_004821232.1 | TetR/AcrR family transcriptional regulator | - |
| AS4_RS09735 (AS4_19650) | - | 2126691..2127257 (+) | 567 | WP_034610211.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| AS4_RS09740 (AS4_19660) | xcpV | 2127244..2127627 (+) | 384 | WP_004821236.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AS4_RS09745 (AS4_19670) | xcpW | 2127627..2128283 (+) | 657 | WP_096734012.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AS4_RS09750 (AS4_19680) | gspK | 2128331..2129287 (+) | 957 | WP_096734013.1 | type II secretion system minor pseudopilin GspK | - |
| AS4_RS09755 (AS4_19690) | - | 2129520..2130116 (+) | 597 | WP_096734014.1 | 6-carboxytetrahydropterin synthase | - |
| AS4_RS09760 (AS4_19700) | ung | 2130191..2130904 (+) | 714 | WP_004821244.1 | uracil-DNA glycosylase | - |
| AS4_RS09765 (AS4_19710) | - | 2130901..2132022 (+) | 1122 | WP_034610216.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AS4_RS09770 (AS4_19720) | tadA | 2132029..2132553 (+) | 525 | WP_034610219.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14080.38 Da Isoelectric Point: 10.0997
>NTDB_id=66368 AS4_RS09740 WP_004821236.1 2127244..2127627(+) (xcpV) [Acinetobacter guillouiae strain NBRC 110550]
MKKNKGFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANAILRTKAQFVAQNEISMMMINREWLSGTSSKQVTTQGETWQ
VDKKAESTLSPNVQKIDVQVSLFNPDTGKVEAGITNMVFFNYPIKEK
MKKNKGFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANAILRTKAQFVAQNEISMMMINREWLSGTSSKQVTTQGETWQ
VDKKAESTLSPNVQKIDVQVSLFNPDTGKVEAGITNMVFFNYPIKEK
Nucleotide
Download Length: 384 bp
>NTDB_id=66368 AS4_RS09740 WP_004821236.1 2127244..2127627(+) (xcpV) [Acinetobacter guillouiae strain NBRC 110550]
ATGAAGAAAAATAAAGGCTTTACTTTAATTGAGGTGGTTGTGGCTTTGGCGATTTTTGCAGTCGCAGCAATGGCTTTGAC
CAAAGTCGCGATGCAATATACGCAGTCGACCGCCAATGCGATTTTACGAACCAAGGCTCAGTTTGTTGCACAGAATGAAA
TCTCAATGATGATGATTAATCGTGAATGGCTGTCAGGAACGTCATCCAAACAAGTCACCACACAAGGTGAAACTTGGCAG
GTAGATAAAAAAGCAGAATCTACACTGAGCCCAAATGTACAAAAAATAGATGTGCAAGTGAGCCTTTTTAATCCTGATAC
GGGTAAAGTAGAAGCAGGGATTACCAATATGGTGTTCTTTAATTATCCGATCAAAGAAAAATAA
ATGAAGAAAAATAAAGGCTTTACTTTAATTGAGGTGGTTGTGGCTTTGGCGATTTTTGCAGTCGCAGCAATGGCTTTGAC
CAAAGTCGCGATGCAATATACGCAGTCGACCGCCAATGCGATTTTACGAACCAAGGCTCAGTTTGTTGCACAGAATGAAA
TCTCAATGATGATGATTAATCGTGAATGGCTGTCAGGAACGTCATCCAAACAAGTCACCACACAAGGTGAAACTTGGCAG
GTAGATAAAAAAGCAGAATCTACACTGAGCCCAAATGTACAAAAAATAGATGTGCAAGTGAGCCTTTTTAATCCTGATAC
GGGTAAAGTAGAAGCAGGGATTACCAATATGGTGTTCTTTAATTATCCGATCAAAGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
79.2 |
98.425 |
0.78 |