Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MNO09_RS09835 Genome accession   NZ_CP093325
Coordinates   1410419..1410877 (-) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus sp. N5-665     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1405419..1415877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNO09_RS09810 (MNO09_09730) - 1405534..1407075 (-) 1542 WP_000445749.1 MDR family MFS transporter -
  MNO09_RS09815 (MNO09_09735) - 1407501..1408001 (+) 501 WP_000870035.1 hypothetical protein -
  MNO09_RS09820 (MNO09_09740) - 1408033..1408266 (-) 234 WP_000939452.1 SPP1 phage holin family protein -
  MNO09_RS09825 (MNO09_09745) - 1408430..1409071 (+) 642 WP_000680838.1 diguanylate cyclase -
  MNO09_RS09830 (MNO09_09750) - 1409725..1410387 (+) 663 WP_000922487.1 YkyA family protein -
  MNO09_RS09835 (MNO09_09755) kre 1410419..1410877 (-) 459 WP_000804864.1 YkyB family protein Regulator
  MNO09_RS09840 (MNO09_09760) ppx 1411055..1412593 (+) 1539 WP_000658859.1 exopolyphosphatase -
  MNO09_RS09845 (MNO09_09765) - 1412702..1414810 (+) 2109 WP_000421692.1 polyphosphate kinase -
  MNO09_RS09850 (MNO09_09770) - 1414984..1415220 (-) 237 WP_000283743.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=663607 MNO09_RS09835 WP_000804864.1 1410419..1410877(-) (kre) [Bacillus sp. N5-665]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=663607 MNO09_RS09835 WP_000804864.1 1410419..1410877(-) (kre) [Bacillus sp. N5-665]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAGGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACCAAAGAAGATTTTCGAATCCTACCACATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493