Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilW   Type   Machinery gene
Locus tag   AS4_RS01750 Genome accession   NZ_AP014630
Coordinates   371162..372073 (+) Length   303 a.a.
NCBI ID   WP_227548111.1    Uniprot ID   -
Organism   Acinetobacter guillouiae strain NBRC 110550     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 366162..377073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS4_RS01725 (AS4_03350) rpoZ 367876..368157 (-) 282 WP_004718302.1 DNA-directed RNA polymerase subunit omega -
  AS4_RS01730 (AS4_03360) gmk 368279..368899 (-) 621 WP_034617459.1 guanylate kinase -
  AS4_RS01735 (AS4_03370) ispH 369034..369984 (+) 951 WP_096732771.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  AS4_RS01740 (AS4_03380) - 370126..370635 (+) 510 WP_167468922.1 Tfp pilus assembly protein FimT/FimU -
  AS4_RS01745 (AS4_03390) pilV 370632..371153 (+) 522 WP_034617453.1 type IV pilus modification protein PilV Machinery gene
  AS4_RS01750 (AS4_03400) pilW 371162..372073 (+) 912 WP_227548111.1 PilW family protein Machinery gene
  AS4_RS01755 (AS4_03410) - 372057..372836 (+) 780 WP_096732777.1 pilus assembly PilX N-terminal domain-containing protein -
  AS4_RS01760 (AS4_03420) - 372853..376788 (+) 3936 WP_227548112.1 PilC/PilY family type IV pilus protein -

Sequence

Protein


Download         Length: 303 a.a.        Molecular weight: 32602.17 Da        Isoelectric Point: 7.7945

>NTDB_id=66358 AS4_RS01750 WP_227548111.1 371162..372073(+) (pilW) [Acinetobacter guillouiae strain NBRC 110550]
MTKHEIMGPQKGFTLIELIVALAIGLIISAAALQLFTGGLITAKMQEASAELQDSGVFGVDYIARDIRLANFGNVNNPVL
DTTTPNGGIIFTSGDPALGKANLQLKDVSAGLLTKSGGPTGASSSSDQLTIMFQAPNKMMNCEGREVQASEYVIQRYFLR
TDNGNLALACDANTPGNSVPSIAGLSDSNNGEVIMPRVDLVRFYIGAKAGNNFSYYTIEQFKTAVKAASSPNIPRVVSIR
MMVLVRSKDPITNKNIDPSKESFNFPDGDVTLTDKSTKYLRRLYTTNIALRNGLGEKIYETSN

Nucleotide


Download         Length: 912 bp        

>NTDB_id=66358 AS4_RS01750 WP_227548111.1 371162..372073(+) (pilW) [Acinetobacter guillouiae strain NBRC 110550]
ATGACAAAGCACGAAATAATGGGACCTCAGAAGGGTTTCACACTAATTGAATTGATCGTTGCTCTTGCTATCGGTCTTAT
TATTAGCGCTGCAGCTTTGCAATTGTTCACTGGTGGTTTAATTACGGCAAAAATGCAAGAAGCAAGTGCAGAGTTACAGG
ATAGTGGGGTGTTCGGTGTCGATTATATTGCTAGAGATATCCGTCTCGCGAATTTTGGAAATGTAAATAATCCAGTGTTA
GATACAACAACACCCAATGGTGGAATTATTTTTACCAGTGGAGACCCAGCTTTAGGCAAGGCAAATTTACAATTAAAAGA
TGTAAGTGCAGGATTGTTAACAAAATCAGGAGGTCCTACTGGGGCGAGTTCTAGTAGTGATCAACTCACGATTATGTTTC
AAGCACCCAATAAAATGATGAACTGTGAAGGTAGAGAAGTACAGGCTAGTGAGTATGTTATTCAGCGTTATTTCTTAAGG
ACAGATAATGGTAACTTGGCATTGGCTTGTGATGCAAATACCCCAGGAAATAGTGTCCCTTCTATTGCCGGATTAAGTGA
TTCAAATAATGGTGAAGTGATTATGCCAAGAGTGGATCTTGTTAGATTTTACATCGGAGCAAAAGCTGGAAACAATTTTA
GCTATTACACTATTGAGCAATTTAAGACAGCAGTAAAGGCGGCGTCCTCTCCAAATATTCCTAGAGTTGTTTCCATTAGA
ATGATGGTTTTGGTGCGCTCTAAAGATCCAATAACAAATAAAAATATAGATCCATCTAAAGAAAGTTTTAATTTCCCTGA
TGGTGACGTGACTTTGACGGATAAAAGTACCAAATATTTACGACGTTTATATACAACAAATATTGCATTAAGAAATGGCT
TAGGAGAGAAGATTTATGAAACATCGAACTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(9-33)

Type IV Pilus-assembly protein W (PilW)

(157-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilW Acinetobacter baumannii D1279779

46.291

100

0.515

Multiple sequence alignment