Detailed information    

insolico Bioinformatically predicted

Overview


Name   hns   Type   Regulator
Locus tag   AS4_RS01185 Genome accession   NZ_AP014630
Coordinates   256838..257164 (+) Length   108 a.a.
NCBI ID   WP_004718506.1    Uniprot ID   A0A077KSH9
Organism   Acinetobacter guillouiae strain NBRC 110550     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 251838..262164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS4_RS01160 (AS4_02300) hemC 252421..253344 (+) 924 WP_056517319.1 hydroxymethylbilane synthase -
  AS4_RS01165 (AS4_02310) - 253358..254140 (+) 783 WP_096732672.1 uroporphyrinogen-III synthase -
  AS4_RS01170 (AS4_02320) - 254137..254967 (+) 831 WP_096732674.1 hypothetical protein -
  AS4_RS01175 (AS4_02330) - 254972..256165 (+) 1194 WP_096732676.1 hypothetical protein -
  AS4_RS01180 (AS4_02340) - 256175..256612 (+) 438 WP_034617650.1 thioesterase family protein -
  AS4_RS01185 (AS4_02350) hns 256838..257164 (+) 327 WP_004718506.1 H-NS family nucleoid-associated regulatory protein Regulator
  AS4_RS01190 (AS4_02360) gspN 257328..258071 (+) 744 WP_004818496.1 type II secretion system protein N -
  AS4_RS01195 (AS4_02370) - 258071..258916 (+) 846 WP_004818497.1 type II secretion system protein N -
  AS4_RS01200 (AS4_02380) gspD 258958..261207 (+) 2250 WP_096732678.1 type II secretion system secretin GspD -
  AS4_RS01205 (AS4_02390) - 261392..262114 (+) 723 WP_096732680.1 FHA domain-containing protein -

Sequence


Protein


Download         Length: 108 a.a.        Molecular weight: 12384.15 Da        Isoelectric Point: 8.4038

>NTDB_id=66350 AS4_RS01185 WP_004718506.1 256838..257164(+) (hns) [Acinetobacter guillouiae strain NBRC 110550]
MMPDISNLSVEELRKLTAEAEALIESKKDQAVEDAYNKIIEIAQSAGLTLEQFIEYGAQKRKKTTRKAVEPRYRNKKDTS
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=66350 AS4_RS01185 WP_004718506.1 256838..257164(+) (hns) [Acinetobacter guillouiae strain NBRC 110550]
ATGATGCCTGATATTAGTAATTTATCGGTTGAAGAGTTAAGAAAGTTAACAGCTGAAGCAGAAGCTTTAATTGAAAGTAA
AAAAGACCAAGCAGTTGAAGATGCCTATAATAAAATTATTGAAATTGCGCAATCTGCTGGTTTAACTTTAGAACAGTTTA
TTGAATACGGCGCGCAAAAGCGTAAAAAGACAACGCGTAAAGCTGTTGAGCCGCGTTACCGCAATAAAAAAGATACTTCT
GAAACTTGGACTGGACGCGGTAAACAACCACGTTGGTTGGTTGCAGAAATCGAAAAAGGTGCAAAATTAGAAGATTTCTT
GATCTAA

Domains


Predicted by InterproScan.

(12-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A077KSH9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

78.704

100

0.787


Multiple sequence alignment