Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MM326_RS13075 Genome accession   NZ_CP093302
Coordinates   2423753..2423941 (-) Length   62 a.a.
NCBI ID   WP_099301326.1    Uniprot ID   -
Organism   Alkalihalobacillus sp. LMS6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2418753..2428941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM326_RS13060 (MM326_13005) fabF 2421113..2422354 (-) 1242 WP_099301323.1 beta-ketoacyl-ACP synthase II -
  MM326_RS13065 (MM326_13010) - 2422397..2423332 (-) 936 WP_099301324.1 beta-ketoacyl-ACP synthase III -
  MM326_RS13070 (MM326_13015) - 2423442..2423756 (-) 315 WP_099301325.1 hypothetical protein -
  MM326_RS13075 (MM326_13020) comZ 2423753..2423941 (-) 189 WP_099301326.1 ComZ family protein Regulator
  MM326_RS13080 (MM326_13025) - 2424090..2425694 (+) 1605 WP_099301327.1 peptide chain release factor 3 -
  MM326_RS13085 (MM326_13030) - 2425741..2426484 (-) 744 WP_099301328.1 STAS domain-containing protein -
  MM326_RS13090 (MM326_13035) - 2426471..2427130 (-) 660 WP_099301329.1 B12-binding domain-containing protein -
  MM326_RS13095 (MM326_13040) - 2427226..2427936 (-) 711 WP_099301330.1 NAD-dependent epimerase/dehydratase family protein -
  MM326_RS13100 (MM326_13045) - 2427966..2428619 (-) 654 WP_255223449.1 hypothetical protein -
  MM326_RS13105 (MM326_13050) - 2428752..2428931 (-) 180 WP_255223450.1 YjzC family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7204.36 Da        Isoelectric Point: 4.1515

>NTDB_id=663371 MM326_RS13075 WP_099301326.1 2423753..2423941(-) (comZ) [Alkalihalobacillus sp. LMS6]
MTEQEKNMAFMQIAMKYVPEAKEMLEAKGIEIGFDDLQPMLALFTKVMNEAYELGQKDEEQK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=663371 MM326_RS13075 WP_099301326.1 2423753..2423941(-) (comZ) [Alkalihalobacillus sp. LMS6]
ATGACTGAACAAGAAAAAAACATGGCGTTTATGCAAATTGCAATGAAATACGTACCTGAAGCGAAAGAAATGTTAGAAGC
AAAGGGGATTGAAATAGGTTTCGATGATCTTCAGCCGATGTTAGCTTTGTTTACAAAAGTAATGAATGAGGCATATGAAT
TAGGTCAAAAGGATGAGGAGCAAAAATGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.929

90.323

0.532