Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG220_RS22330 Genome accession   NZ_CP108582
Coordinates   5001121..5002242 (-) Length   373 a.a.
NCBI ID   WP_326688769.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01187     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4996121..5007242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG220_RS22310 (OG220_22300) - 4996244..4996813 (-) 570 WP_326688773.1 TetR/AcrR family transcriptional regulator -
  OG220_RS22315 (OG220_22305) - 4997195..4998820 (+) 1626 WP_405807458.1 MDR family MFS transporter -
  OG220_RS22320 (OG220_22310) - 4998950..4999921 (-) 972 WP_326688771.1 A/G-specific adenine glycosylase -
  OG220_RS22325 (OG220_22315) - 5000148..5001017 (+) 870 WP_405804943.1 hypothetical protein -
  OG220_RS22330 (OG220_22320) disA 5001121..5002242 (-) 1122 WP_326688769.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG220_RS22335 (OG220_22325) radA/sms 5002568..5003956 (-) 1389 WP_326688768.1 DNA repair protein RadA Machinery gene
  OG220_RS22340 (OG220_22330) - 5004166..5006052 (+) 1887 WP_405807460.1 hypothetical protein -
  OG220_RS22345 (OG220_22335) - 5006093..5006908 (-) 816 WP_326688767.1 hypothetical protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40065.84 Da        Isoelectric Point: 4.9989

>NTDB_id=663355 OG220_RS22330 WP_326688769.1 5001121..5002242(-) (disA) [Streptomyces sp. NBC_01187]
MAANDRAAVPGRAEGASGLMRATLSAVAPGTALRDGLERVLRGNTGGLMVLGMDRTVEALCTGGFVLDVDFSATRLRELC
KLDGALILDGDISKIVRAGVQLVPDASIETEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYVEGQRRVLEDSAAILS
RANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVE
PERELVVRDYAPQAGGSGRRVRTVPEALSELDRLTHTELLELPTVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGTV
IDRLVDHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=663355 OG220_RS22330 WP_326688769.1 5001121..5002242(-) (disA) [Streptomyces sp. NBC_01187]
GTGGCAGCCAACGACCGGGCAGCGGTCCCCGGCAGGGCCGAGGGGGCGTCCGGCCTGATGCGCGCGACACTGAGCGCGGT
CGCACCGGGCACAGCCCTGCGCGACGGGCTGGAGCGCGTCCTGCGGGGGAACACCGGCGGCCTCATGGTCCTCGGCATGG
ACAGGACGGTCGAAGCGCTGTGCACCGGCGGCTTCGTCCTCGACGTGGACTTCAGCGCGACCCGGCTGCGCGAGCTGTGC
AAGCTGGACGGCGCGCTCATCCTCGACGGGGACATCTCCAAGATCGTCCGGGCCGGTGTGCAGCTCGTCCCCGACGCCTC
CATCGAGACCGAGGAGACGGGCACCCGGCACCGCACCGCCCAGCGCGTCTCGATCCAGACCGGCTTCCCGGTCGTCTCCG
TCAGCCAGTCCATGCGGCTGATCGCCCTCTACGTCGAGGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCGATCCTCTCC
CGTGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTGCGGCTCGACGAGGTCGCCGGCACGCTCTCCGCGCTGGA
GATCGAGGACCTGGTGACCGTCCGGGACGTCACGGCCGTCGCCCAGCGCCTGGAGATGGTGCGCAGGATCGCCACGGAGA
TCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGACGGCTGCTCTCGCTCCAGCTCGACGAGCTGATCGCCGGGGTGGAG
CCCGAGCGCGAGCTGGTCGTGCGGGACTACGCGCCGCAGGCGGGCGGTTCGGGCCGCCGCGTGCGCACCGTGCCCGAGGC
GCTCAGCGAACTGGACCGGCTCACCCACACCGAGTTGCTCGAACTGCCCACGGTGGCACGGGCACTGGGCTACAGCGGGG
CCCCCGAGACGCTGGATTCCGCCGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGACCGTC
ATCGACCGGCTGGTGGACCACTTCGGCGGGCTTCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGGCGGTGGACGG
CGTCGGCGAGGCCCGTGCCCGCTCGGTCCGCGAGGGCCTCTCGCGGCTGGCCGAGTCCTCGATCCTTGAGCGCTACGTCT
AG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.886

94.37

0.424