Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MM300_RS10360 Genome accession   NZ_CP093301
Coordinates   2209413..2210363 (+) Length   316 a.a.
NCBI ID   WP_255244975.1    Uniprot ID   -
Organism   Evansella sp. LMS18     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2204413..2215363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM300_RS10340 (MM300_10315) - 2204797..2205816 (-) 1020 WP_255244971.1 ATP-grasp domain-containing protein -
  MM300_RS10345 (MM300_10320) - 2206097..2207278 (+) 1182 WP_255244972.1 acetyl-CoA C-acetyltransferase -
  MM300_RS10350 (MM300_10325) - 2207382..2208089 (-) 708 WP_255244973.1 DUF421 domain-containing protein -
  MM300_RS10355 (MM300_10330) - 2208645..2209094 (+) 450 WP_255244974.1 MarR family winged helix-turn-helix transcriptional regulator -
  MM300_RS10360 (MM300_10335) ceuB 2209413..2210363 (+) 951 WP_255244975.1 ABC transporter permease Machinery gene
  MM300_RS10365 (MM300_10340) - 2210356..2211303 (+) 948 WP_255244976.1 iron chelate uptake ABC transporter family permease subunit -
  MM300_RS10370 (MM300_10345) - 2211303..2212058 (+) 756 WP_255244977.1 ABC transporter ATP-binding protein -
  MM300_RS10375 (MM300_10350) - 2212238..2213269 (+) 1032 WP_255244978.1 siderophore ABC transporter substrate-binding protein -
  MM300_RS10380 (MM300_10355) - 2213683..2214228 (+) 546 WP_255244979.1 hypothetical protein -
  MM300_RS10385 (MM300_10360) - 2214250..2214573 (+) 324 WP_255244980.1 antibiotic biosynthesis monooxygenase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34914.14 Da        Isoelectric Point: 9.7551

>NTDB_id=663330 MM300_RS10360 WP_255244975.1 2209413..2210363(+) (ceuB) [Evansella sp. LMS18]
MRLWYLVAALIIMSFISLFLGVHNISPLDIFQLTEEQREILLVSRVPRLISIIIAGMGMSICGLIMQQLTRNKFVSPTTA
GTMDSARLGVLVSLMLFASASPFVKALVAFAFALAGTLIFMKILDKVRYKDAIFIPLVGLMFGNIIGSITTFFALREDLV
QNMSSWLQGNFSLIISGRYELLYISIPVLVIVYMYANKFTVAGMGEEFATNLGLNHKRIVHLGLILVALVTSVVILTVGI
IPFLGLIIPNIVSIYRGDNLRNSIPHTALLGAVFVLFCDILGRVIIYPYEIPIGMTVGVLGSGIFLYLLLRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=663330 MM300_RS10360 WP_255244975.1 2209413..2210363(+) (ceuB) [Evansella sp. LMS18]
ATGAGATTATGGTATTTAGTCGCCGCACTAATAATAATGTCGTTCATTTCTCTGTTTCTCGGTGTACATAATATTTCGCC
GCTGGACATTTTTCAGTTAACAGAGGAACAGAGGGAGATTCTGCTTGTAAGCAGGGTGCCCAGGCTGATCAGCATTATCA
TAGCCGGGATGGGGATGAGTATTTGCGGACTCATCATGCAGCAGCTTACGAGAAATAAATTTGTATCTCCAACGACAGCG
GGGACAATGGATTCTGCAAGGCTGGGTGTGTTAGTTTCCTTAATGCTTTTCGCATCGGCAAGCCCCTTTGTGAAAGCGCT
GGTCGCTTTTGCCTTTGCTCTCGCAGGGACGCTCATCTTTATGAAAATACTTGATAAAGTAAGGTACAAGGATGCGATAT
TCATTCCCCTTGTTGGACTCATGTTCGGGAATATCATCGGGTCAATCACAACGTTTTTCGCACTCCGCGAGGACCTTGTA
CAAAATATGTCATCGTGGCTGCAAGGCAATTTCTCCCTGATTATCAGCGGGAGATATGAGCTTTTATATATAAGCATTCC
AGTTTTAGTCATCGTTTATATGTATGCCAACAAGTTTACGGTTGCCGGAATGGGCGAGGAATTCGCCACGAACCTCGGGC
TCAACCATAAGCGGATTGTCCATCTTGGGCTTATCCTTGTGGCGCTTGTAACATCGGTGGTTATCCTCACCGTCGGGATC
ATCCCGTTTCTCGGTCTGATTATCCCGAACATCGTCTCCATCTACAGGGGAGACAACTTAAGAAACAGCATTCCTCACAC
AGCATTGCTTGGAGCAGTATTCGTTCTGTTCTGCGACATTCTCGGCCGGGTGATAATTTACCCGTACGAGATACCGATTG
GAATGACTGTCGGAGTGCTTGGAAGCGGTATCTTCCTCTACTTGCTGCTGAGGAGGAAAGCTTATGAGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.063

100

0.551