Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG519_RS20130 Genome accession   NZ_CP108580
Coordinates   4818402..4819562 (-) Length   386 a.a.
NCBI ID   WP_405585741.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01190     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4813402..4824562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG519_RS20110 (OG519_20055) - 4814056..4814898 (-) 843 WP_405585730.1 hypothetical protein -
  OG519_RS20115 (OG519_20060) - 4814886..4815416 (-) 531 WP_405585733.1 SigE family RNA polymerase sigma factor -
  OG519_RS20120 (OG519_20065) - 4816098..4817096 (-) 999 WP_405585736.1 A/G-specific adenine glycosylase -
  OG519_RS20125 (OG519_20070) - 4817378..4818289 (+) 912 WP_405585739.1 hypothetical protein -
  OG519_RS20130 (OG519_20075) disA 4818402..4819562 (-) 1161 WP_405585741.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG519_RS20135 (OG519_20080) radA/sms 4819878..4821263 (-) 1386 WP_405585744.1 DNA repair protein RadA Machinery gene
  OG519_RS20140 (OG519_20085) - 4821445..4823406 (+) 1962 WP_405585747.1 BACON domain-containing protein -
  OG519_RS20145 (OG519_20090) - 4823530..4824315 (-) 786 WP_405592860.1 hypothetical protein -

Sequence


Protein


Download         Length: 386 a.a.        Molecular weight: 41378.18 Da        Isoelectric Point: 5.0154

>NTDB_id=663289 OG519_RS20130 WP_405585741.1 4818402..4819562(-) (disA) [Streptomyces sp. NBC_01190]
MAANDRAGGTNPARRAAGDSAGRSGGGPGADGGLMRASLSAVAPGTALRDGLERIVRGNTGGLIVLGMDKTVESLCTGGF
VLDVEFTATRLRELCKLDGALIIDKDITKILRAGVQLVPDPAIPTEETGTRHRTADRVSRQVNFPVVSVSQSMRLIALYV
DGQRRVLEDSAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVIELGTDG
RLLSLQLDELIAGVEPERDLVARDYVPEPTAKRSRTVAEALAELDTLPQNELIELTTVARALGYTGSPESLDSAVSPRGY
RLLAKVPRLPNAVIERLVDHFGGLQKLLAASVDDLQTVEGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1161 bp        

>NTDB_id=663289 OG519_RS20130 WP_405585741.1 4818402..4819562(-) (disA) [Streptomyces sp. NBC_01190]
GTGGCAGCCAACGACCGGGCAGGGGGCACGAACCCGGCCCGAAGGGCAGCGGGGGACTCCGCCGGCAGGTCCGGCGGAGG
TCCCGGGGCCGACGGCGGGCTGATGCGCGCCTCGCTGAGCGCCGTAGCGCCCGGCACCGCCCTGCGCGACGGCCTGGAAC
GGATCGTCCGCGGCAACACGGGCGGCCTCATCGTGCTGGGCATGGACAAGACGGTCGAGTCGCTGTGCACCGGCGGCTTC
GTCCTCGATGTGGAGTTCACCGCGACCCGGCTGCGCGAGCTGTGCAAGCTGGACGGCGCGCTCATCATCGACAAGGACAT
CACCAAGATCCTGCGGGCCGGGGTGCAGCTGGTGCCCGACCCGGCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCA
CCGCCGACCGGGTCAGCCGTCAGGTCAACTTCCCGGTGGTCTCGGTCAGCCAGTCGATGCGGCTGATCGCGTTGTACGTC
GACGGCCAGCGCCGCGTGCTGGAGGACTCGGCGGCGATCCTGTCCCGGGCCAACCAGGCACTGGCCACCCTGGAGCGCTA
CAAGCTGCGGCTCGACGAGGTGGCCGGCACGCTCTCCGCGCTGGAGATCGAGGATCTGGTCACCGTCAGGGACGTCACGG
CGGTCGCCCAGCGGCTGGAGATGGTGCGCCGGATCGCCACCGAAATCGCCGAGTACGTGATCGAGTTGGGTACCGACGGC
CGGCTGCTGTCGCTCCAGCTCGATGAGCTGATCGCCGGGGTCGAGCCGGAAAGGGACCTGGTGGCGCGGGATTACGTGCC
CGAGCCCACCGCCAAGCGGAGCCGTACGGTGGCGGAGGCGCTCGCCGAGCTGGACACGCTGCCGCAGAACGAGCTGATCG
AACTCACCACGGTGGCCCGTGCGCTGGGCTACACCGGGTCGCCGGAGTCGCTGGACTCGGCGGTCTCGCCGCGGGGTTAC
CGGCTGCTGGCGAAGGTGCCGCGGCTGCCCAACGCCGTGATAGAGCGGCTGGTGGACCACTTCGGCGGGCTCCAGAAGCT
GCTCGCGGCGAGCGTGGACGACCTTCAGACGGTGGAGGGCGTCGGCGAGGCGCGGGCCCGGTCGGTCCGGGAGGGGCTCT
CGCGGCTCGCGGAGTCCTCGATCCTGGAACGTTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.087

89.637

0.404