Detailed information NTG0066323

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R21_RS23080
• Genome accession: NZ_AP022159
• Coordinates: 4842801..4843826 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP5-S18-ESBL-07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4837801..4848826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R21_RS23070 (WP5S18E07_44660)	rpmE	4840032..4840244 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R21_RS23075 (WP5S18E07_44670)	priA	4840447..4842645 (+)	2199	WP_001550368.1	primosomal protein N'	Machinery gene
H7R21_RS23080 (WP5S18E07_44680)	cytR	4842801..4843826 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7R21_RS23085 (WP5S18E07_44690)	ftsN	4843918..4844877 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R21_RS23090 (WP5S18E07_44700)	hslV	4844970..4845500 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R21_RS23095 (WP5S18E07_44710)	hslU	4845510..4846841 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R21_RS23100 (WP5S18E07_44720)	menA	4846908..4847834 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R21_RS23105 (WP5S18E07_44730)	rraA	4847927..4848412 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R21_RS23110 (WP5S18E07_44740)	zapB	4848497..4848742 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=66323 H7R21_RS23080 WP_000644908.1 4842801..4843826(+) (cytR) [Escherichia coli strain WP5-S18-ESBL-07]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=66323 H7R21_RS23080 WP_000644908.1 4842801..4843826(+) (cytR) [Escherichia coli strain WP5-S18-ESBL-07]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625