Detailed information NTG0663153

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: OG702_RS22470
• Genome accession: NZ_CP108568
• Coordinates: 5024219..5025214 (+)
• Length: 331 a.a.
• NCBI ID: WP_327290716.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01198
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 5019219..5030214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG702_RS22445 (OG702_22480)	-	5019381..5020034 (+)	654	WP_327290711.1	TetR/AcrR family transcriptional regulator	-
OG702_RS22450 (OG702_22485)	-	5020260..5021768 (+)	1509	WP_327290712.1	MFS transporter	-
OG702_RS22455 (OG702_22490)	-	5021937..5022554 (-)	618	WP_327290713.1	hypothetical protein	-
OG702_RS22460 (OG702_22495)	-	5022575..5023360 (-)	786	WP_327290714.1	class III extradiol ring-cleavage dioxygenase	-
OG702_RS22465 (OG702_22500)	-	5023467..5023985 (-)	519	WP_327290715.1	N-acetyltransferase family protein	-
OG702_RS22470 (OG702_22505)	rpoS	5024219..5025214 (+)	996	WP_327290716.1	sigma-70 family RNA polymerase sigma factor	Regulator
OG702_RS22475 (OG702_22510)	-	5025381..5026127 (+)	747	WP_327290717.1	VIT family protein	-
OG702_RS22480 (OG702_22515)	-	5026252..5027418 (-)	1167	WP_327290718.1	PLP-dependent cysteine synthase family protein	-
OG702_RS22485 (OG702_22520)	-	5027625..5027837 (+)	213	WP_327293324.1	hypothetical protein	-
OG702_RS22490 (OG702_22525)	-	5027860..5028333 (-)	474	WP_327290719.1	MscL family protein	-
OG702_RS22495 (OG702_22530)	-	5028436..5028807 (-)	372	WP_327290720.1	hypothetical protein	-
OG702_RS22500 (OG702_22535)	-	5029289..5030146 (-)	858	WP_327290721.1	S-methyl-5'-thioadenosine phosphorylase	-

Sequence

Protein

• Length: 331 a.a.
• Molecular weight: 36616.29 Da
• Isoelectric Point: 4.9681

>NTDB_id=663153 OG702_RS22470 WP_327290716.1 5024219..5025214(+) (rpoS) [Streptomyces sp. NBC_01198]
MATRAVARRHAGGTSSVRAAGGEVADRDLVGMYLDEIARTPLLDAAREVELSRDIEAGVYAERILAADPELPAGAGGDIG
REELEALVAAGENAKDVFIRSNLRLVVAVARRYPRSGLPLLDLIQEGNAGLVRAVEKFDYAKGFKFSTYATWWIRQAITR
SIADQSRTIRLPVHLVEELGRIRRVQREFNREHGRDAEPAEIAKELASTPERVSDVLDWARDPVSLNMSVDAEGETEFGD
LVEDGAAPSPEDSVLVMLRREELDGLIDRLDDRTASIIRARYGIVDGRERTLTEVGKEHGLTRERIRQIEKHALADLKRM
ARATGLDYEAA

Nucleotide

• Length: 996 bp

>NTDB_id=663153 OG702_RS22470 WP_327290716.1 5024219..5025214(+) (rpoS) [Streptomyces sp. NBC_01198]
ATGGCAACCCGTGCCGTCGCCCGTCGTCACGCAGGCGGGACCAGCAGCGTTCGCGCCGCAGGCGGGGAAGTAGCCGACCG
CGACCTCGTCGGCATGTACCTGGACGAGATCGCGCGTACGCCGCTGCTCGACGCCGCCCGCGAGGTCGAACTGTCCAGGG
ACATCGAAGCAGGCGTCTACGCCGAGCGTATCCTCGCCGCCGACCCCGAACTGCCCGCGGGTGCGGGTGGCGACATCGGC
CGCGAAGAGCTCGAGGCCCTGGTGGCCGCGGGCGAGAACGCCAAGGACGTCTTCATCCGCTCCAACCTGCGGCTCGTCGT
GGCCGTCGCCCGACGCTACCCCCGCAGCGGTCTGCCGCTGCTCGACCTGATCCAGGAGGGGAACGCCGGCCTTGTCCGCG
CCGTTGAGAAGTTCGACTACGCCAAGGGCTTCAAGTTCTCCACCTACGCGACGTGGTGGATCAGGCAGGCCATCACCAGG
TCCATCGCCGACCAGTCCCGCACCATCAGGCTGCCGGTACACCTGGTCGAGGAGCTGGGCCGGATCCGGCGCGTGCAGCG
CGAGTTCAACCGCGAGCATGGCCGCGATGCCGAGCCCGCCGAGATCGCCAAGGAACTGGCATCTACTCCGGAACGCGTTT
CGGACGTGCTGGACTGGGCACGTGATCCGGTGTCGCTGAATATGTCGGTGGACGCCGAGGGCGAGACCGAATTCGGTGAC
CTGGTCGAGGACGGCGCAGCGCCGTCCCCGGAGGACTCGGTGCTGGTGATGCTGCGCCGAGAGGAGCTGGACGGACTGAT
CGACCGGCTCGATGACCGCACCGCCTCCATCATCCGGGCCCGCTACGGCATCGTGGACGGCCGCGAGCGCACTTTGACCG
AGGTCGGCAAGGAGCACGGTCTGACCCGCGAACGCATCCGCCAGATCGAAAAGCACGCGCTCGCCGATCTCAAGCGGATG
GCCCGCGCGACCGGCCTGGACTACGAAGCCGCCTGA

Domains

Predicted by InterProScan.

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (28-61)

• Sigma-70, region 4 (Sigma70_r4) (267-318)

• Sigma-70 region 2 (Sigma70_r2) (98-167)

• Sigma-70 region 3 (Sigma70_r3) (177-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	39.604	91.541	0.363