Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MN093_RS02045 Genome accession   NZ_CP093291
Coordinates   417088..417546 (+) Length   152 a.a.
NCBI ID   WP_002192638.1    Uniprot ID   R8I4H6
Organism   Bacillus mycoides strain DSM 2048     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 412088..422546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MN093_RS02030 (MN093_02030) - 412752..412988 (+) 237 WP_002014830.1 hypothetical protein -
  MN093_RS02035 (MN093_02035) - 413155..415263 (-) 2109 WP_002014829.1 polyphosphate kinase -
  MN093_RS02040 (MN093_02040) - 415372..416946 (-) 1575 WP_215576532.1 Ppx/GppA family phosphatase -
  MN093_RS02045 (MN093_02045) kre 417088..417546 (+) 459 WP_002192638.1 YkyB family protein Regulator
  MN093_RS02050 (MN093_02050) - 417578..418240 (-) 663 WP_105590041.1 YkyA family protein -
  MN093_RS02055 (MN093_02055) - 418882..419523 (-) 642 WP_002192636.1 diguanylate cyclase domain-containing protein -
  MN093_RS02060 (MN093_02060) - 419688..419921 (+) 234 WP_002192635.1 SPP1 phage holin family protein -
  MN093_RS02065 (MN093_02065) - 419953..420453 (-) 501 WP_002192634.1 hypothetical protein -
  MN093_RS02070 (MN093_02070) - 420879..422420 (+) 1542 WP_215576534.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17727.42 Da        Isoelectric Point: 10.6793

>NTDB_id=663101 MN093_RS02045 WP_002192638.1 417088..417546(+) (kre) [Bacillus mycoides strain DSM 2048]
MKPSQPQSPLHNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKDDFRTLPHLGHLESSYRNPKTTLSLTIAKKTLQDYIGPEALKQEKKLSEAVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=663101 MN093_RS02045 WP_002192638.1 417088..417546(+) (kre) [Bacillus mycoides strain DSM 2048]
ATGAAACCTTCACAACCACAATCTCCATTGCATAATCAACATTCTATTAATAGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAACCCTAAGTACTTATATTGGTTAAAAAAGACTGCTTTAGAACGCTTAATTACTGAAA
AAAAGGCTATCAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGTCAACAACAATCCGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATCCCTCCTACGAAAGATGATTTTCGCACCCTACCGCATCTTGGTCACCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAATAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGCGAAGCAGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I4H6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487