Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   MNG38_RS18700 Genome accession   NZ_CP093289
Coordinates   3585712..3586869 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain H2     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3580712..3591869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS18670 (MNG38_18670) yvyF 3580965..3581384 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MNG38_RS18675 (MNG38_18675) comFC 3581458..3582180 (-) 723 WP_003227991.1 comF operon protein ComFC Machinery gene
  MNG38_RS18680 (MNG38_18680) comFB 3582144..3582440 (-) 297 WP_003227989.1 late competence protein ComFB -
  MNG38_RS18685 (MNG38_18685) comFA 3582500..3583891 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  MNG38_RS18690 (MNG38_18690) fakBA 3583997..3584842 (-) 846 WP_003244125.1 DegV family protein -
  MNG38_RS18695 (MNG38_18695) degU 3584940..3585629 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MNG38_RS18700 (MNG38_18700) degS 3585712..3586869 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  MNG38_RS18705 (MNG38_18705) yvyE 3587086..3587739 (+) 654 WP_003227979.1 YigZ family protein -
  MNG38_RS18710 (MNG38_18710) tagV 3587739..3588914 (+) 1176 WP_015251114.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  MNG38_RS18715 (MNG38_18715) tagO 3588988..3590064 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  MNG38_RS18720 (MNG38_18720) tuaH 3590209..3591402 (-) 1194 WP_072692828.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=663017 MNG38_RS18700 WP_003227983.1 3585712..3586869(-) (degS) [Bacillus subtilis strain H2]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=663017 MNG38_RS18700 WP_003227983.1 3585712..3586869(-) (degS) [Bacillus subtilis strain H2]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATCATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1