Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   MNG38_RS14430 Genome accession   NZ_CP093289
Coordinates   2760950..2761696 (-) Length   248 a.a.
NCBI ID   WP_072592551.1    Uniprot ID   -
Organism   Bacillus subtilis strain H2     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2755950..2766696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS14405 (MNG38_14405) mreC 2756356..2757228 (-) 873 WP_003222609.1 rod shape-determining protein MreC -
  MNG38_RS14410 (MNG38_14410) mreB 2757259..2758272 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  MNG38_RS14415 (MNG38_14415) radC 2758364..2759059 (-) 696 WP_015251546.1 RadC family protein -
  MNG38_RS14420 (MNG38_14420) maf 2759096..2759665 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  MNG38_RS14425 (MNG38_14425) spoIIB 2759818..2760816 (-) 999 WP_015251545.1 stage II sporulation protein SpoIIB -
  MNG38_RS14430 (MNG38_14430) comC 2760950..2761696 (-) 747 WP_072592551.1 prepilin peptidase Machinery gene
  MNG38_RS14435 (MNG38_14435) folC 2761836..2763128 (-) 1293 WP_014480460.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  MNG38_RS14440 (MNG38_14440) valS 2763188..2765830 (-) 2643 WP_242139146.1 valine--tRNA ligase -
  MNG38_RS14445 (MNG38_14445) - 2766278..2766469 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26422.99 Da        Isoelectric Point: 9.7944

>NTDB_id=663004 MNG38_RS14430 WP_072592551.1 2760950..2761696(-) (comC) [Bacillus subtilis strain H2]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=663004 MNG38_RS14430 WP_072592551.1 2760950..2761696(-) (comC) [Bacillus subtilis strain H2]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGAACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCACATCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTTTGTTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCAGTTTTGATAGGTGCATTATATGGAGCGGCAGCTGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTCGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.597

100

0.996