Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | MNG38_RS13175 | Genome accession | NZ_CP093289 |
| Coordinates | 2552089..2552499 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain H2 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2547622..2598948 | 2552089..2552499 | within | 0 |
Gene organization within MGE regions
Location: 2547622..2598948
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNG38_RS13150 (MNG38_13150) | yqeF | 2547622..2548353 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| MNG38_RS13155 (MNG38_13155) | cwlH | 2548605..2549357 (-) | 753 | WP_015251672.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| MNG38_RS13160 (MNG38_13160) | yqeD | 2549544..2550170 (+) | 627 | WP_015251671.1 | TVP38/TMEM64 family protein | - |
| MNG38_RS13165 (MNG38_13165) | gnd | 2550189..2551082 (-) | 894 | WP_015251670.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| MNG38_RS13170 (MNG38_13170) | yqeB | 2551334..2552056 (+) | 723 | WP_010886572.1 | hypothetical protein | - |
| MNG38_RS13175 (MNG38_13175) | nucA/comI | 2552089..2552499 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| MNG38_RS13180 (MNG38_13180) | - | 2552695..2553045 (+) | 351 | Protein_2554 | sigma-70 family RNA polymerase sigma factor | - |
| MNG38_RS13185 (MNG38_13185) | spoIVCA | 2553073..2554533 (-) | 1461 | WP_223257626.1 | site-specific DNA recombinase SpoIVCA | - |
| MNG38_RS13190 (MNG38_13190) | - | 2554491..2554669 (-) | 179 | Protein_2556 | hypothetical protein | - |
| MNG38_RS13195 (MNG38_13195) | arsC | 2555024..2555443 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| MNG38_RS13200 (MNG38_13200) | acr3 | 2555455..2556495 (-) | 1041 | WP_032722149.1 | arsenite efflux transporter Acr3 | - |
| MNG38_RS13205 (MNG38_13205) | arsK | 2556518..2556958 (-) | 441 | WP_032722151.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| MNG38_RS13210 (MNG38_13210) | arsR | 2557017..2557334 (-) | 318 | WP_029318103.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| MNG38_RS13215 (MNG38_13215) | yqcI | 2557706..2558470 (-) | 765 | WP_017696291.1 | YqcI/YcgG family protein | - |
| MNG38_RS13220 (MNG38_13220) | rapE | 2558913..2560040 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| MNG38_RS13225 (MNG38_13225) | phrE | 2560030..2560164 (+) | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| MNG38_RS13230 (MNG38_13230) | - | 2560274..2560432 (+) | 159 | WP_003245945.1 | hypothetical protein | - |
| MNG38_RS13235 (MNG38_13235) | yqcG | 2560802..2562397 (+) | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| MNG38_RS13240 (MNG38_13240) | yqcF | 2562412..2562990 (+) | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| MNG38_RS13245 (MNG38_13245) | - | 2563108..2563254 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| MNG38_RS13250 (MNG38_13250) | - | 2563251..2563613 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| MNG38_RS13255 (MNG38_13255) | - | 2563629..2564108 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
| MNG38_RS13260 (MNG38_13260) | cwlA | 2564273..2565091 (-) | 819 | WP_017697459.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| MNG38_RS13265 (MNG38_13265) | skhD | 2565136..2565558 (-) | 423 | WP_017697460.1 | holin family protein | - |
| MNG38_RS13270 (MNG38_13270) | xepA | 2565604..2566497 (-) | 894 | WP_032722160.1 | phage-like element PBSX protein XepA | - |
| MNG38_RS13275 (MNG38_13275) | yqcE | 2566585..2566749 (-) | 165 | WP_003229944.1 | XkdX family protein | - |
| MNG38_RS13280 (MNG38_13280) | yqcD | 2566746..2567081 (-) | 336 | WP_009967793.1 | XkdW family protein | - |
| MNG38_RS13285 (MNG38_13285) | yqcC | 2567091..2568191 (-) | 1101 | WP_032722161.1 | pyocin knob domain-containing protein | - |
| MNG38_RS13290 (MNG38_13290) | - | 2568195..2568467 (-) | 273 | WP_032722163.1 | hypothetical protein | - |
| MNG38_RS13295 (MNG38_13295) | yqcA | 2568464..2569042 (-) | 579 | WP_032722164.1 | YmfQ family protein | - |
| MNG38_RS13300 (MNG38_13300) | yqbT | 2569026..2570072 (-) | 1047 | WP_032722165.1 | baseplate J/gp47 family protein | - |
| MNG38_RS13305 (MNG38_13305) | yqbS | 2570065..2570490 (-) | 426 | WP_032722166.1 | DUF2634 domain-containing protein | - |
| MNG38_RS13310 (MNG38_13310) | yqbR | 2570503..2570769 (-) | 267 | WP_032722167.1 | DUF2577 family protein | - |
| MNG38_RS13315 (MNG38_13315) | - | 2570766..2571746 (-) | 981 | WP_032722168.1 | hypothetical protein | - |
| MNG38_RS13320 (MNG38_13320) | yqbP | 2571759..2572418 (-) | 660 | WP_032722169.1 | LysM peptidoglycan-binding domain-containing protein | - |
| MNG38_RS13325 (MNG38_13325) | yqbO | 2572411..2577168 (-) | 4758 | WP_043940167.1 | phage tail tape measure protein | - |
| MNG38_RS13330 (MNG38_13330) | - | 2577171..2577308 (-) | 138 | WP_021480099.1 | hypothetical protein | - |
| MNG38_RS13335 (MNG38_13335) | - | 2577350..2577799 (-) | 450 | WP_032722171.1 | phage tail assembly chaperone | - |
| MNG38_RS13340 (MNG38_13340) | txpA | 2577945..2578124 (+) | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | - |
| MNG38_RS13345 (MNG38_13345) | bsrH | 2578504..2578593 (+) | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| MNG38_RS13350 (MNG38_13350) | yqbM | 2578847..2579290 (-) | 444 | WP_003229930.1 | phage tail tube protein | - |
| MNG38_RS13355 (MNG38_13355) | yqbK | 2579293..2580693 (-) | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| MNG38_RS13360 (MNG38_13360) | - | 2580694..2580885 (-) | 192 | WP_010886574.1 | hypothetical protein | - |
| MNG38_RS13365 (MNG38_13365) | yqbJ | 2580882..2581319 (-) | 438 | WP_003229927.1 | DUF6838 family protein | - |
| MNG38_RS13370 (MNG38_13370) | yqbI | 2581332..2581835 (-) | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| MNG38_RS13375 (MNG38_13375) | yqbH | 2581832..2582194 (-) | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| MNG38_RS13380 (MNG38_13380) | gkpG | 2582191..2582586 (-) | 396 | WP_004398566.1 | DUF3199 family protein | - |
| MNG38_RS13385 (MNG38_13385) | yqbF | 2582590..2582901 (-) | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| MNG38_RS13390 (MNG38_13390) | skdG | 2582912..2583847 (-) | 936 | WP_003229922.1 | phage major capsid protein | - |
| MNG38_RS13395 (MNG38_13395) | yqbD | 2583866..2584834 (-) | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| MNG38_RS13400 (MNG38_13400) | - | 2584867..2585520 (-) | 654 | WP_003229920.1 | hypothetical protein | - |
| MNG38_RS13405 (MNG38_13405) | yqbB | 2585561..2586478 (-) | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| MNG38_RS13410 (MNG38_13410) | yqbA | 2586475..2588007 (-) | 1533 | WP_004398894.1 | phage portal protein | - |
| MNG38_RS13415 (MNG38_13415) | stmB | 2588011..2589306 (-) | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| MNG38_RS13420 (MNG38_13420) | terS | 2589299..2590018 (-) | 720 | WP_003229916.1 | phage terminase small subunit | - |
| MNG38_RS13425 (MNG38_13425) | - | 2590086..2590550 (-) | 465 | WP_004398685.1 | hypothetical protein | - |
| MNG38_RS13430 (MNG38_13430) | yqaQ | 2590694..2591149 (-) | 456 | WP_004398775.1 | hypothetical protein | - |
| MNG38_RS13435 (MNG38_13435) | - | 2591347..2592276 (+) | 930 | WP_003229913.1 | hypothetical protein | - |
| MNG38_RS13440 (MNG38_13440) | yqaO | 2592350..2592556 (-) | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| MNG38_RS13445 (MNG38_13445) | yqaN | 2592638..2593066 (-) | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| MNG38_RS13450 (MNG38_13450) | - | 2593162..2593311 (-) | 150 | WP_003229910.1 | hypothetical protein | - |
| MNG38_RS13455 (MNG38_13455) | sknM | 2593302..2594243 (-) | 942 | WP_075058863.1 | ATP-binding protein | - |
| MNG38_RS13460 (MNG38_13460) | yqaL | 2594125..2594802 (-) | 678 | WP_116362964.1 | DnaD domain-containing protein | - |
| MNG38_RS13465 (MNG38_13465) | recT | 2594878..2595732 (-) | 855 | WP_003229907.1 | recombinase RecT | - |
| MNG38_RS13470 (MNG38_13470) | yqaJ | 2595735..2596694 (-) | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| MNG38_RS13475 (MNG38_13475) | yqaI | 2596800..2596994 (-) | 195 | WP_003229905.1 | YqaI family protein | - |
| MNG38_RS13480 (MNG38_13480) | - | 2596954..2597127 (-) | 174 | WP_119123069.1 | hypothetical protein | - |
| MNG38_RS13485 (MNG38_13485) | sknH | 2597124..2597381 (-) | 258 | WP_003245994.1 | YqaH family protein | - |
| MNG38_RS13490 (MNG38_13490) | yqaG | 2597378..2597947 (-) | 570 | WP_004398626.1 | helix-turn-helix domain-containing protein | - |
| MNG38_RS13495 (MNG38_13495) | - | 2598021..2598161 (-) | 141 | WP_003229902.1 | hypothetical protein | - |
| MNG38_RS13500 (MNG38_13500) | yqaF | 2598191..2598421 (-) | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| MNG38_RS13505 (MNG38_13505) | sknR | 2598598..2598948 (+) | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=663000 MNG38_RS13175 WP_009967785.1 2552089..2552499(-) (nucA/comI) [Bacillus subtilis strain H2]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=663000 MNG38_RS13175 WP_009967785.1 2552089..2552499(-) (nucA/comI) [Bacillus subtilis strain H2]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCTGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGCTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGAGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTACGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCTGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGCTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGAGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTACGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |