Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MNG38_RS08035 Genome accession   NZ_CP093289
Coordinates   1519651..1520226 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain H2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1514651..1525226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS08005 (MNG38_08005) dapD 1514837..1515547 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MNG38_RS08010 (MNG38_08010) dapI 1515617..1516741 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  MNG38_RS08015 (MNG38_08015) ykuS 1516803..1517048 (+) 246 WP_003232382.1 YkuS family protein -
  MNG38_RS08020 (MNG38_08020) mscT 1517085..1517888 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  MNG38_RS08025 (MNG38_08025) ahpA 1518125..1518667 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  MNG38_RS08030 (MNG38_08030) ykuV 1518739..1519185 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  MNG38_RS08035 (MNG38_08035) rok 1519651..1520226 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  MNG38_RS08040 (MNG38_08040) cse15 1520267..1521232 (-) 966 WP_048654871.1 spore protein Cse15 -
  MNG38_RS08045 (MNG38_08045) mobA 1521369..1521968 (+) 600 WP_015252185.1 molybdenum cofactor guanylyltransferase -
  MNG38_RS08050 (MNG38_08050) moeB 1522019..1523038 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  MNG38_RS08055 (MNG38_08055) glp 1523056..1524348 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  MNG38_RS08060 (MNG38_08060) mobB 1524309..1524830 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=662978 MNG38_RS08035 WP_003232378.1 1519651..1520226(+) (rok) [Bacillus subtilis strain H2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=662978 MNG38_RS08035 WP_003232378.1 1519651..1520226(+) (rok) [Bacillus subtilis strain H2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1