Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG735_RS31305 Genome accession   NZ_CP108549
Coordinates   6865129..6865914 (-) Length   261 a.a.
NCBI ID   WP_326653047.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01210     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6860129..6870914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG735_RS31290 (OG735_31325) - 6860370..6861104 (+) 735 WP_327326479.1 GNAT family N-acetyltransferase -
  OG735_RS31295 (OG735_31330) - 6861164..6862975 (+) 1812 WP_327326480.1 IucA/IucC family siderophore biosynthesis protein -
  OG735_RS31300 (OG735_31335) - 6863025..6864995 (+) 1971 WP_327326481.1 ATP-dependent DNA helicase -
  OG735_RS31305 (OG735_31340) dinR/lexA 6865129..6865914 (-) 786 WP_326653047.1 transcriptional repressor LexA Regulator
  OG735_RS31310 (OG735_31345) nrdR 6866478..6866990 (+) 513 WP_327326482.1 transcriptional regulator NrdR -
  OG735_RS31315 (OG735_31350) - 6867160..6870045 (+) 2886 WP_327326483.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28271.03 Da        Isoelectric Point: 8.0891

>NTDB_id=662785 OG735_RS31305 WP_326653047.1 6865129..6865914(-) (dinR/lexA) [Streptomyces sp. NBC_01210]
MTTTADSATITAQDRSQNRFEPVHAMNDAATTPEGPKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKRESGHVWLLPHNAAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=662785 OG735_RS31305 WP_326653047.1 6865129..6865914(-) (dinR/lexA) [Streptomyces sp. NBC_01210]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAACCGATTCGAGCCGGTGCATGCCATGAA
TGACGCAGCCACGACCCCGGAGGGTCCCAAGCCCACGCGTTCGCTGCCCGGCCGACCTCCAGGGATCCGGGCAGACAGCT
CCGGCCTCACGGATCGGCAGCGGCGCGTCATCGAGGTGATCCGGGACTCCGTGCAGCGGCGCGGATACCCACCGTCGATG
CGCGAGATCGGTCAGGCGGTAGGCCTGTCCAGCACCTCATCCGTCGCACATCAACTGATGGCGCTGGAGCGCAAGGGCTT
CCTGCGCAGGGACCCGCACCGGCCCAGGGCGTACGAGGTACGCGGCTCCGACCAGCCCAGCACCCAGCCGACGGACACGA
CGGGCAAGCCCGCCGCGTCGTACGTGCCACTCGTCGGCCGAATCGCGGCAGGCGGCCCGATCCTTGCGGAGGAATCCGTC
GAGGACGTCTTCCCGCTCCCACGCCAGCTGGTCGGGGACGGCGAGCTGTTCGTACTGAAGGTCGTCGGCGACTCGATGAT
CGAGGCCGCGATCTGTGACGGGGACTGGGTGACGGTGCGACGCCAGCCCGTCGCGGAGAACGGGGACATCGTGGCCGCAA
TGCTGGACGGCGAGGCCACCGTCAAGCGGTTCAAGCGGGAGAGCGGCCATGTGTGGCTGCTCCCGCACAACGCTGCGTAC
CAGCCCATCCCCGGTGACGAGGCGACGATCCTCGGCAAGGTGGTGGCGGTGCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(143-255)

LexA DNA binding domain (LexA_DNA_bind)

(54-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.755

81.226

0.372