Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | NCGM1900_RS11880 | Genome accession | NZ_AP014622 |
| Coordinates | 2474041..2474598 (+) | Length | 185 a.a. |
| NCBI ID | WP_003094697.1 | Uniprot ID | A0A6N0KGD7 |
| Organism | Pseudomonas aeruginosa strain NCGM1900 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2469041..2479598
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCGM1900_RS11860 (NCGM1900_2386) | pilR | 2470317..2471654 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| NCGM1900_RS11865 (NCGM1900_2387) | thiO | 2471700..2472794 (-) | 1095 | WP_003094695.1 | glycine oxidase ThiO | - |
| NCGM1900_RS11870 | - | 2472929..2473438 (+) | 510 | WP_015503652.1 | GspH/FimT family pseudopilin | - |
| NCGM1900_RS11875 (NCGM1900_2388) | - | 2473544..2474050 (+) | 507 | WP_003094696.1 | GspH/FimT family pseudopilin | - |
| NCGM1900_RS11880 (NCGM1900_2389) | pilV | 2474041..2474598 (+) | 558 | WP_003094697.1 | type 4a pilus minor pilin PilV | Machinery gene |
| NCGM1900_RS11885 (NCGM1900_2390) | pilW | 2474595..2475419 (+) | 825 | WP_003094698.1 | type 4a pilus minor pilin PilW | - |
| NCGM1900_RS11890 (NCGM1900_2391) | pilX | 2475416..2476003 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| NCGM1900_RS11895 (NCGM1900_2392) | pilY1 | 2476015..2479506 (+) | 3492 | WP_003094704.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20069.21 Da Isoelectric Point: 8.2164
>NTDB_id=66239 NCGM1900_RS11880 WP_003094697.1 2474041..2474598(+) (pilV) [Pseudomonas aeruginosa strain NCGM1900]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=66239 NCGM1900_RS11880 WP_003094697.1 2474041..2474598(+) (pilV) [Pseudomonas aeruginosa strain NCGM1900]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |