Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MNU55_RS06600 | Genome accession | NZ_CP093196 |
| Coordinates | 1353587..1354561 (+) | Length | 324 a.a. |
| NCBI ID | WP_001831109.1 | Uniprot ID | A0A9Q5JKD6 |
| Organism | Staphylococcus epidermidis strain TMDU-2014-62 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1348587..1359561
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNU55_RS06565 (MNU55_06565) | rpmG | 1349067..1349216 (+) | 150 | WP_001830957.1 | 50S ribosomal protein L33 | - |
| MNU55_RS06570 (MNU55_06570) | - | 1349399..1349950 (+) | 552 | WP_001831001.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MNU55_RS06575 (MNU55_06575) | - | 1349951..1351411 (+) | 1461 | WP_002484879.1 | rhomboid family intramembrane serine protease | - |
| MNU55_RS06580 (MNU55_06580) | - | 1351395..1351595 (+) | 201 | WP_001831138.1 | YqgQ family protein | - |
| MNU55_RS06585 (MNU55_06585) | - | 1351595..1352581 (+) | 987 | WP_001831113.1 | ROK family glucokinase | - |
| MNU55_RS06590 (MNU55_06590) | - | 1352581..1352907 (+) | 327 | WP_001831234.1 | MTH1187 family thiamine-binding protein | - |
| MNU55_RS06595 (MNU55_06595) | - | 1352907..1353530 (+) | 624 | WP_001831016.1 | MBL fold metallo-hydrolase | - |
| MNU55_RS06600 (MNU55_06600) | comGA | 1353587..1354561 (+) | 975 | WP_001831109.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MNU55_RS06605 (MNU55_06605) | comGB | 1354533..1355600 (+) | 1068 | WP_001831131.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MNU55_RS06610 (MNU55_06610) | comGC | 1355618..1355935 (+) | 318 | WP_001831271.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MNU55_RS06615 (MNU55_06615) | comGD | 1355925..1356362 (+) | 438 | WP_001831025.1 | competence type IV pilus minor pilin ComGD | - |
| MNU55_RS06620 (MNU55_06620) | - | 1356349..1356642 (+) | 294 | WP_001831116.1 | hypothetical protein | - |
| MNU55_RS06625 (MNU55_06625) | - | 1356566..1357057 (+) | 492 | WP_002440043.1 | competence type IV pilus minor pilin ComGF | - |
| MNU55_RS06630 (MNU55_06630) | - | 1357222..1357734 (+) | 513 | WP_002440040.1 | shikimate kinase | - |
| MNU55_RS06635 (MNU55_06635) | gcvT | 1357952..1359043 (+) | 1092 | WP_001831107.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37330.44 Da Isoelectric Point: 8.8174
>NTDB_id=662362 MNU55_RS06600 WP_001831109.1 1353587..1354561(+) (comGA) [Staphylococcus epidermidis strain TMDU-2014-62]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=662362 MNU55_RS06600 WP_001831109.1 1353587..1354561(+) (comGA) [Staphylococcus epidermidis strain TMDU-2014-62]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.062 |
100 |
0.701 |
| comGA | Staphylococcus aureus N315 |
70.062 |
100 |
0.701 |