Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   OG609_RS29710 Genome accession   NZ_CP108529
Coordinates   6606190..6607266 (-) Length   358 a.a.
NCBI ID   WP_327275648.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01224     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 6601190..6612266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG609_RS29690 (OG609_29765) cobT 6602410..6603522 (-) 1113 WP_327275645.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -
  OG609_RS29695 (OG609_29770) - 6603618..6604457 (-) 840 WP_327275646.1 class I SAM-dependent methyltransferase -
  OG609_RS29700 (OG609_29775) - 6604519..6605721 (-) 1203 WP_327275647.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  OG609_RS29705 (OG609_29780) - 6605849..6606058 (+) 210 WP_093893560.1 hypothetical protein -
  OG609_RS29710 (OG609_29785) htrA 6606190..6607266 (-) 1077 WP_327275648.1 trypsin-like peptidase domain-containing protein Regulator
  OG609_RS29715 (OG609_29790) - 6607360..6608112 (-) 753 WP_327278226.1 methyltransferase domain-containing protein -
  OG609_RS29720 (OG609_29795) - 6608202..6608801 (-) 600 WP_327278227.1 DUF3043 domain-containing protein -
  OG609_RS29725 (OG609_29800) - 6609098..6609880 (+) 783 WP_093893567.1 PspA/IM30 family protein -
  OG609_RS29730 (OG609_29805) - 6609890..6610168 (+) 279 WP_327275649.1 hypothetical protein -
  OG609_RS29735 (OG609_29810) - 6610340..6611599 (+) 1260 WP_327275650.1 histidine kinase -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 35983.92 Da        Isoelectric Point: 6.4940

>NTDB_id=662340 OG609_RS29710 WP_327275648.1 6606190..6607266(-) (htrA) [Streptomyces sp. NBC_01224]
MDASHSRSRVRRLLLPLTAGACAVALVSGCSDANSDSPAAQPTTSASASRTVGDLQNEYQDVIKNVLPSVVQIEASNSLG
SGVIYDSKGHIVTNAHVVGNEKTFKVTVATGEKVLRASLVAAYPEQDLAVIKLADVPAGLKPAKFGDSEKVAVGQIVLAM
GSPLGLSSSVTQGIVSALGRTVSEGSAGGGTGATIANMVQTSAAINPGNSGGALVNLNSEVIGIPTLGAIDPQMGDSAAP
GIGFAIPVSMVKTIADQIIKSGKVTDSGRAALNITGRTVVDDTYHPVGVALVGLTKGGAADKAGLRVGDVITKLGDLPVP
TITSLSEALASDKPGEKVTVTYLRNGAEKTAQVTLGEI

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=662340 OG609_RS29710 WP_327275648.1 6606190..6607266(-) (htrA) [Streptomyces sp. NBC_01224]
ATGGATGCATCCCACTCCCGCAGCCGTGTACGCCGTCTGCTGCTGCCTCTGACCGCAGGTGCCTGCGCAGTCGCCCTGGT
GAGCGGCTGCTCGGACGCGAACTCCGATTCTCCGGCGGCCCAACCCACCACGTCGGCCTCCGCTTCCCGGACCGTCGGCG
ATCTGCAGAACGAATACCAGGACGTGATCAAGAACGTCCTGCCGTCGGTCGTGCAGATCGAAGCCTCCAACAGCCTGGGC
TCCGGCGTCATCTACGACTCCAAGGGCCATATCGTCACCAACGCCCATGTGGTCGGCAACGAGAAGACATTCAAGGTCAC
CGTCGCCACCGGCGAGAAGGTGCTGCGGGCCTCGCTGGTCGCCGCGTACCCGGAACAGGATCTGGCCGTCATCAAGCTCG
CCGACGTCCCGGCAGGGCTGAAGCCCGCGAAGTTCGGCGACTCGGAGAAGGTCGCGGTGGGACAGATCGTGCTGGCGATG
GGCTCGCCGCTCGGGCTGTCCTCCAGCGTCACCCAGGGCATCGTCTCGGCGCTCGGCCGGACCGTCAGCGAAGGCAGCGC
GGGCGGTGGCACGGGCGCGACGATCGCGAACATGGTGCAGACCTCGGCGGCGATCAACCCGGGCAACAGCGGCGGTGCGC
TGGTCAACCTGAACAGCGAGGTGATCGGCATCCCGACGCTGGGGGCGATCGACCCGCAGATGGGTGACAGCGCGGCGCCG
GGGATCGGGTTCGCGATCCCCGTGTCGATGGTGAAGACGATCGCCGATCAGATCATCAAGAGCGGCAAGGTCACCGACTC
GGGCCGGGCGGCGCTGAACATCACCGGACGCACGGTCGTCGACGACACCTACCATCCGGTCGGGGTGGCGCTGGTCGGCT
TGACGAAGGGCGGCGCCGCGGACAAGGCGGGGCTGCGGGTCGGCGATGTCATCACCAAGCTCGGCGATCTGCCGGTCCCG
ACGATCACCTCCCTGTCGGAGGCGCTGGCCTCGGACAAGCCGGGCGAGAAGGTCACGGTGACGTATCTGCGCAACGGGGC
GGAGAAGACGGCGCAGGTCACCCTGGGCGAGATCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

34.656

100

0.366