Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG763_RS42615 Genome accession   NZ_CP108522
Coordinates   9411715..9411921 (+) Length   68 a.a.
NCBI ID   WP_327424939.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01230     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 9406715..9416921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG763_RS42590 (OG763_42660) - 9406960..9408144 (-) 1185 WP_327424934.1 IS701 family transposase -
  OG763_RS42595 (OG763_42665) - 9409035..9409505 (-) 471 WP_327424935.1 hypothetical protein -
  OG763_RS42600 (OG763_42670) - 9409649..9409801 (+) 153 WP_327424936.1 hypothetical protein -
  OG763_RS42605 (OG763_42675) - 9410351..9411268 (-) 918 WP_327424937.1 aminoglycoside phosphotransferase family protein -
  OG763_RS42610 (OG763_42680) - 9411466..9411708 (+) 243 WP_327424938.1 hypothetical protein -
  OG763_RS42615 (OG763_42685) dinR/lexA 9411715..9411921 (+) 207 WP_327424939.1 hypothetical protein Regulator
  OG763_RS42620 (OG763_42690) - 9412362..9412994 (+) 633 WP_327424940.1 M15 family metallopeptidase -
  OG763_RS42625 (OG763_42695) rpmG 9413399..9413563 (+) 165 WP_327424941.1 50S ribosomal protein L33 -
  OG763_RS42630 (OG763_42705) - 9413891..9414013 (+) 123 WP_030927574.1 ribosomal protein bL36 -
  OG763_RS42635 (OG763_42710) - 9414130..9414537 (+) 408 WP_327424942.1 hypothetical protein -
  OG763_RS42640 (OG763_42715) - 9414591..9414857 (-) 267 WP_327424943.1 hypothetical protein -
  OG763_RS42645 (OG763_42720) - 9415193..9416398 (+) 1206 WP_327424944.1 hypothetical protein -
  OG763_RS42650 (OG763_42725) - 9416392..9416673 (-) 282 WP_327424945.1 hypothetical protein -

Sequence

Protein


Download         Length: 68 a.a.        Molecular weight: 7484.71 Da        Isoelectric Point: 11.8517

>NTDB_id=662277 OG763_RS42615 WP_327424939.1 9411715..9411921(+) (dinR/lexA) [Streptomyces sp. NBC_01230]
MVSPRQESILRVIRNSIIDCGEGPTVRQIGGRVGLPSTSSVVYQLGRLEGLGLISRSCRRWRSCRLGT

Nucleotide


Download         Length: 207 bp        

>NTDB_id=662277 OG763_RS42615 WP_327424939.1 9411715..9411921(+) (dinR/lexA) [Streptomyces sp. NBC_01230]
ATGGTGTCACCGAGGCAGGAGTCGATCCTCAGGGTCATCCGGAACTCGATCATCGATTGTGGTGAGGGGCCGACCGTGCG
GCAGATTGGCGGGCGCGTCGGCCTACCCAGCACCAGCTCCGTCGTTTACCAGCTCGGCCGCCTCGAAGGACTGGGCCTCA
TCAGCCGCAGCTGCCGCCGCTGGCGCTCGTGCCGGCTCGGCACCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(3-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

43.077

95.588

0.412