Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   MNU35_RS01660 Genome accession   NZ_CP093170
Coordinates   372375..373040 (+) Length   221 a.a.
NCBI ID   WP_002447011.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain TMDU-128     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 367375..378040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNU35_RS01645 (MNU35_01650) - 368731..370275 (+) 1545 WP_254106288.1 NAD(P)H-binding protein -
  MNU35_RS01650 (MNU35_01655) - 370399..371868 (-) 1470 WP_002490478.1 alkaline phosphatase -
  MNU35_RS01655 (MNU35_01660) - 372165..372344 (+) 180 WP_002447010.1 hypothetical protein -
  MNU35_RS01660 (MNU35_01665) braR 372375..373040 (+) 666 WP_002447011.1 response regulator transcription factor Regulator
  MNU35_RS01665 (MNU35_01670) braS 373046..373942 (+) 897 WP_002475631.1 HAMP domain-containing sensor histidine kinase Regulator
  MNU35_RS01670 (MNU35_01675) - 374053..374802 (+) 750 WP_002490451.1 ABC transporter ATP-binding protein -
  MNU35_RS01675 (MNU35_01680) - 374804..376816 (+) 2013 WP_145452146.1 FtsX-like permease family protein -
  MNU35_RS01680 (MNU35_01685) - 376920..377510 (+) 591 WP_020363892.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25643.77 Da        Isoelectric Point: 5.1924

>NTDB_id=662094 MNU35_RS01660 WP_002447011.1 372375..373040(+) (braR) [Staphylococcus epidermidis strain TMDU-128]
MKIFIVEDDLVIAESLANELSKWNYEVHVIDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=662094 MNU35_RS01660 WP_002447011.1 372375..373040(+) (braR) [Staphylococcus epidermidis strain TMDU-128]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGATTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATTCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGCGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787